RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 EBF1Q9UH73 591 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 DMXL1Q9Y485 3027 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 SDK1Q7Z5N4 2213 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 SPAG17Q6Q759 2223 aa15.64■□□□□ 0.09
UBE3B-212ENST00000540230 DCLK1O15075 740 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 TBL1XO60907 577 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 PTMSP20962 102 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 RPS24P62847 133 aaKnown RBP15.63■□□□□ 0.09
UBE3B-212ENST00000540230 CDK17Q00537 523 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 FAM102AQ5T9C2 384 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-212ENST00000540230 RAP1GAP2Q684P5 730 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 KIAA1211LQ6NV74 962 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 NUDT18Q6ZVK8 323 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 ANKS1BQ7Z6G8 1248 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 PHLDB2Q86SQ0 1253 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 CHPFQ8IZ52 775 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 SLC30A5Q8TAD4 765 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 OLIG1Q8TAK6 271 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 GAB3Q8WWW8 586 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 SORCS1Q8WY21 1168 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 BAP1Q92560 729 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 CD248Q9HCU0 757 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 STIM2Q9P246 746 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 INVSQ9Y283 1065 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 RAD54BQ9Y620 910 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 DCHS1Q96JQ0 3298 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 MUC22E2RYF6 1773 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-212ENST00000540230 ZNF292O60281 2723 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 DNAH14Q0VDD8 3507 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 A0A1W2PQF6 199 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 TCRBV21S2A2A0A5A6 115 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 GOLGA8SH3BPF8 625 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 RPP40O75818 363 aaKnown RBP15.63■□□□□ 0.09
UBE3B-212ENST00000540230 APOEP02649 317 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 UNGP13051 313 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-212ENST00000540230 HOXB2P14652 356 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 NTSR1P30989 418 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 CNR2P34972 360 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 NOS2P35228 1153 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 FLT3P36888 993 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 GGCXP38435 758 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 ZNF445P59923 1031 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 NME3Q13232 169 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 MS4A13Q5J8X5 152 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 MMS22LQ6ZRQ5 1243 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 CACNA2D4Q7Z3S7 1137 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 ZDHHC17Q8IUH5 632 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 CFAP52Q8N1V2 620 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 KCNV2Q8TDN2 545 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 RUBCNQ92622 972 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 NPY6RQ99463 290 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 SLC2A11Q9BYW1 496 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 ANLNQ9NQW6 1124 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 ABCB8Q9NUT2 735 aa15.63■□□□□ 0.09
UBE3B-212ENST00000540230 KCNU1A8MYU2 1149 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 I6L893 689 aaPredicted RBP15.62■□□□□ 0.09
UBE3B-212ENST00000540230 M0QYT0 321 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 GJB6O95452 261 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 MMP8P22894 467 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 CD70P32970 193 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 MATKP42679 507 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 IL12RB1P42701 662 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 ATXN1P54253 815 aaKnown RBP15.62■□□□□ 0.09
UBE3B-212ENST00000540230 SNX16P57768 344 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 PTP4A2Q12974 167 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 E4F1Q66K89 784 aaPredicted RBP15.62■□□□□ 0.09
UBE3B-212ENST00000540230 CEP68Q76N32 757 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 TRMT11Q7Z4G4 463 aaKnown RBP15.62■□□□□ 0.09
UBE3B-212ENST00000540230 KBTBD6Q86V97 674 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 CHSY1Q86X52 802 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 FAM160A2Q8N612 972 aaPredicted RBP15.62■□□□□ 0.09
UBE3B-212ENST00000540230 BTN2A3PQ96KV6 586 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 TBCBQ99426 244 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 PRMT1Q99873 361 aaKnown RBP15.62■□□□□ 0.09
UBE3B-212ENST00000540230 GABRG3Q99928 467 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 HINFPQ9BQA5 517 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 C11orf70Q9BRQ4 267 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 METTL5Q9NRN9 209 aaKnown RBP15.62■□□□□ 0.09
UBE3B-212ENST00000540230 PIGVQ9NUD9 493 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.62■□□□□ 0.09
UBE3B-212ENST00000540230 ELOVL2Q9NXB9 296 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.62■□□□□ 0.09
UBE3B-212ENST00000540230 NCDNQ9UBB6 729 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 TMEM59LQ9UK28 342 aa15.62■□□□□ 0.09
UBE3B-212ENST00000540230 ABCA7Q8IZY2 2146 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 SERPINC1P01008 464 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 GABRG2P18507 467 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 TACR2P21452 398 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 SCNN1AP37088 669 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 SULT1E1P49888 294 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 FANCCQ00597 558 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 NR1I3Q14994 352 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 FILIP1LQ4L180 1135 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 FSCBQ5H9T9 825 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 MPP7Q5T2T1 576 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 IRF2BP2Q7Z5L9 587 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 KIAA0907Q7Z7F0 614 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-212ENST00000540230 CIR1Q86X95 450 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-212ENST00000540230 LGI2Q8N0V4 545 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 EMC1Q8N766 993 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms