RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 LYNP07948 512 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 PDHA1P08559 390 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 TRIM49P0CI25 452 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 TRIM49CP0CI26 452 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 DLATP10515 647 aaKnown RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 ESRRAP11474 423 aaPredicted RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 CPA3P15088 417 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 IL9P15248 144 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 RRM1P23921 792 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 GSTT1P30711 240 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 RPA3P35244 121 aaPredicted RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 THPOP40225 353 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 CTSOP43234 321 aaPredicted RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 TUBP50607 506 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 RNF144AP50876 292 aaPredicted RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 CYP2J2P51589 502 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 AP2B1P63010 937 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 NHLH1Q02575 133 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 GRM2Q14416 872 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 RCN1Q15293 331 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 TMED2Q15363 201 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 SMAD2Q15796 467 aaKnown RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 SEPT7Q16181 437 aaKnown RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 TCTN1Q2MV58 587 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 TBC1D25Q3MII6 688 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 LIN52Q52LA3 116 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 ZC2HC1CQ53FD0 456 aaPredicted RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 PCNX4Q63HM2 1172 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 LVRNQ6Q4G3 990 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 NIPA1Q7RTP0 329 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 BMP8AQ7Z5Y6 402 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 ALYREFQ86V81 257 aaKnown RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 LCA5Q86VQ0 697 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 RBM12BQ8IXT5 1001 aaKnown RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 TMEM192Q8IY95 271 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 ALLCQ8N6M5 410 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 BANPQ8N9N5 519 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 B4GALNT2Q8NHY0 566 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 NRG4Q8WWG1 115 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 KCNN1Q92952 543 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 GFM2Q969S9 779 aaKnown RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 MCUR1Q96AQ8 359 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 FBXL18Q96ME1 805 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 KREMEN1Q96MU8 473 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 SPATA33Q96N06 139 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 NT5C1BQ96P26 610 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 YME1L1Q96TA2 773 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 PDCD2LQ9BRP1 358 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 C17orf80Q9BSJ5 609 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 C16orf70Q9BSU1 422 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 C11orf84Q9BUA3 381 aaPredicted RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 FRMD8Q9BZ67 464 aaPredicted RBP7.93□□□□□ -1.14
CCDC60-204ENST00000539847 TMEM117Q9H0C3 514 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 PCDH9Q9HC56 1237 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 SAYSD1Q9NPB0 183 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 KANSL3Q9P2N6 904 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 HEY2Q9UBP5 337 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 PCDHB2Q9Y5E7 798 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 SCINQ9Y6U3 715 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 MICAL3Q7RTP6 2002 aa7.93□□□□□ -1.14
CCDC60-204ENST00000539847 PTPRSQ13332 1948 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 ARHGEF35A5YM69 484 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 LIASO43766 372 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 CIB2O75838 187 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 TM7SF2O76062 418 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 CBX6O95503 412 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 DLDP09622 509 aaKnown RBP7.92□□□□□ -1.14
CCDC60-204ENST00000539847 ZNF286BP0CG31 522 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 SETSIPP0DME0 302 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 IMPDH2P12268 514 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 PLS3P13797 630 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 ATF4P18848 351 aaPredicted RBP7.92□□□□□ -1.14
CCDC60-204ENST00000539847 EIF2AK2P19525 551 aaKnown RBP7.92□□□□□ -1.14
CCDC60-204ENST00000539847 CDC25CP30307 473 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 PGM1P36871 562 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 ST13P50502 369 aaKnown RBP7.92□□□□□ -1.14
CCDC60-204ENST00000539847 POLE2P56282 527 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 ACTR3P61158 418 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 ASPHQ12797 758 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 SF3A3Q12874 501 aaKnown RBP eCLIP7.92□□□□□ -1.14
CCDC60-204ENST00000539847 GPM6BQ13491 265 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 MAP7Q14244 749 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 PRKD1Q15139 912 aaPredicted RBP7.92□□□□□ -1.14
CCDC60-204ENST00000539847 TCEAL5Q5H9L2 206 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 RNASEH2BQ5TBB1 312 aaKnown RBP7.92□□□□□ -1.14
CCDC60-204ENST00000539847 PLEKHA7Q6IQ23 1121 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 ZNF746Q6NUN9 644 aaPredicted RBP7.92□□□□□ -1.14
CCDC60-204ENST00000539847 TAF2Q6P1X5 1199 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 ZNF449Q6P9G9 518 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 METTL7BQ6UX53 244 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 DSTYKQ6XUX3 929 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.92□□□□□ -1.14
CCDC60-204ENST00000539847 ACAD11Q709F0 780 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 TMCO2Q7Z6W1 182 aaPredicted RBP7.92□□□□□ -1.14
CCDC60-204ENST00000539847 PHF13Q86YI8 300 aaPredicted RBP7.92□□□□□ -1.14
CCDC60-204ENST00000539847 TPH2Q8IWU9 490 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 ST13P4Q8IZP2 240 aaPredicted RBP7.92□□□□□ -1.14
CCDC60-204ENST00000539847 ATP11CQ8NB49 1132 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 KLHL23Q8NBE8 558 aa7.92□□□□□ -1.14
CCDC60-204ENST00000539847 MZB1Q8WU39 189 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms