RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 FAM81BQ96LP2 452 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 ABCB8Q9NUT2 735 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 DNAAF2Q9NVR5 837 aaKnown RBP15.93■□□□□ 0.14
UBE3B-211ENST00000539843 SUN2Q9UH99 717 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 MAN1B1Q9UKM7 699 aa15.93■□□□□ 0.14
UBE3B-211ENST00000539843 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.93■□□□□ 0.14
UBE3B-211ENST00000539843 CAPN9O14815 690 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 MSI1O43347 362 aaKnown RBP15.92■□□□□ 0.14
UBE3B-211ENST00000539843 CER1O95813 267 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 DNTTP04053 509 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 KRT5P13647 590 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 PRKCHP24723 683 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 BRD2P25440 801 aaKnown RBP15.92■□□□□ 0.14
UBE3B-211ENST00000539843 ZBTB16Q05516 673 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 PAK1Q13153 545 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 ZNF423Q2M1K9 1284 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 PKDCCQ504Y2 493 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 DCAF12L1Q5VU92 463 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 BHLHA9Q7RTU4 235 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 MFN1Q8IWA4 741 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 ZCCHC9Q8N567 271 aaKnown RBP15.92■□□□□ 0.14
UBE3B-211ENST00000539843 UBR7Q8N806 425 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 HJURPQ8NCD3 748 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-211ENST00000539843 SLC35F5Q8WV83 523 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 SNX19Q92543 992 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 FAM149B1Q96BN6 582 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 SCNM1Q9BWG6 230 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 FSCN3Q9NQT6 498 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 ST7Q9NRC1 585 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 CTNND2Q9UQB3 1225 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 CHD8Q9HCK8 2581 aa15.92■□□□□ 0.14
UBE3B-211ENST00000539843 BCAT2O15382 392 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-211ENST00000539843 ACSL4O60488 711 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 TBL1XO60907 577 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 RNASEH1O60930 286 aaKnown RBP15.91■□□□□ 0.14
UBE3B-211ENST00000539843 MOCS3O95396 460 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 IGLV3-19P01714 112 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 APOEP02649 317 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 AFPP02771 609 aaKnown RBP15.91■□□□□ 0.14
UBE3B-211ENST00000539843 DLDP09622 509 aaKnown RBP15.91■□□□□ 0.14
UBE3B-211ENST00000539843 HLA-FP30511 346 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 GRIK2Q13002 908 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 CDH18Q13634 790 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 TEAD4Q15561 434 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 MBLAC2Q68D91 279 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 PMF1Q6P1K2 205 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 RRAGAQ7L523 313 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 ENOSF1Q7L5Y1 443 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 PIP4P1Q86T03 277 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.91■□□□□ 0.14
UBE3B-211ENST00000539843 EHBP1Q8NDI1 1231 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 SORCS1Q8WY21 1168 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 DNASE2BQ8WZ79 361 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 AZIN2Q96A70 460 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 MIS12Q9H081 205 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 CD93Q9NPY3 652 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 CLEC4EQ9ULY5 219 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 NCKAP1Q9Y2A7 1128 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 NEUROG3Q9Y4Z2 214 aa15.91■□□□□ 0.14
UBE3B-211ENST00000539843 SPAARA0A1B0GVQ0 90 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 METTL12A8MUP2 240 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 PIK3R2O00459 728 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 ASLP04424 464 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 HLA-EP13747 358 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 MAOBP27338 520 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 COPAP53621 1224 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 KCNH2Q12809 1159 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 NNTQ13423 1086 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 CAMK2GQ13555 558 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-211ENST00000539843 TTI2Q6NXR4 508 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 FAM124AQ86V42 546 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 CYB5D2Q8WUJ1 264 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 TFAP2BQ92481 460 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 BTBD1Q9H0C5 482 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 TJP2Q9UDY2 1190 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 SLC12A6Q9UHW9 1150 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 SCML1Q9UN30 329 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 CEP83Q9Y592 693 aa15.9■□□□□ 0.14
UBE3B-211ENST00000539843 MAP1BP46821 2468 aaKnown RBP15.9■□□□□ 0.14
UBE3B-211ENST00000539843 TNRC6BQ9UPQ9 1833 aaKnown RBP15.89■□□□□ 0.13
UBE3B-211ENST00000539843 MATKP42679 507 aa15.89■□□□□ 0.13
UBE3B-211ENST00000539843 AFF3P51826 1226 aaKnown RBP15.89■□□□□ 0.13
UBE3B-211ENST00000539843 SUZ12Q15022 739 aaKnown RBP15.89■□□□□ 0.13
UBE3B-211ENST00000539843 MEA1Q16626 185 aa15.89■□□□□ 0.13
UBE3B-211ENST00000539843 PIK3R6Q5UE93 754 aa15.89■□□□□ 0.13
UBE3B-211ENST00000539843 RNF219Q5W0B1 726 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-211ENST00000539843 ZNF776Q68DI1 518 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-211ENST00000539843 LRSAM1Q6UWE0 723 aa15.89■□□□□ 0.13
UBE3B-211ENST00000539843 NAXDQ8IW45 347 aa15.89■□□□□ 0.13
UBE3B-211ENST00000539843 GANCQ8TET4 914 aa15.89■□□□□ 0.13
UBE3B-211ENST00000539843 P2RY11Q96G91 374 aa15.89■□□□□ 0.13
UBE3B-211ENST00000539843 MED15Q96RN5 788 aa15.89■□□□□ 0.13
UBE3B-211ENST00000539843 SGK2Q9HBY8 427 aa15.89■□□□□ 0.13
UBE3B-211ENST00000539843 STIM2Q9P246 746 aa15.89■□□□□ 0.13
UBE3B-211ENST00000539843 EIF2B4Q9UI10 523 aaKnown RBP15.89■□□□□ 0.13
UBE3B-211ENST00000539843 APOBEC2Q9Y235 224 aaKnown RBP15.89■□□□□ 0.13
UBE3B-211ENST00000539843 TLR6Q9Y2C9 796 aa15.89■□□□□ 0.13
UBE3B-211ENST00000539843 GON4LQ3T8J9 2241 aa15.88■□□□□ 0.13
UBE3B-211ENST00000539843 C1QTNF9BB2RNN3 333 aa15.88■□□□□ 0.13
UBE3B-211ENST00000539843 KCNJ18B7U540 433 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms