RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 AKR1A1P14550 325 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF23P17027 643 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 EIF4BP23588 611 aaKnown RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 HALP42357 657 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 RAD23AP54725 363 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 FAM98BQ52LJ0 330 aaKnown RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 ILDR2Q71H61 639 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 MTSS1LQ765P7 747 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 PHACTR4Q8IZ21 702 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 STK40Q8N2I9 435 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 EIF1ADQ8N9N8 165 aaKnown RBP6.64□□□□□ -1.35
LSAMP-207ENST00000539563 OSBPL10Q9BXB5 764 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 SETD4Q9NVD3 440 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 CNOT3O75175 753 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 IGSF6O95976 241 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 HOXB8P17481 243 aaPredicted RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 GRK4P32298 578 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 GLRBP48167 497 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 SKP1P63208 163 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 OVGP1Q12889 678 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 ACVR2BQ13705 512 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 CSHL1Q14406 222 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 AGKQ53H12 422 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 CEP78Q5JTW2 689 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 USP50Q70EL3 339 aaPredicted RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 HTR3CQ8WXA8 447 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 BDH2Q9BUT1 245 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 FUT8Q9BYC5 575 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 RAD21L1Q9H4I0 556 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 ABCC13Q9NSE7 274 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 CCDC154A6NI56 674 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 XPO1O14980 1071 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 CPSF4O95639 269 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 CYP3A4P08684 503 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 H2AFXP16104 143 aaPredicted RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 FASP25445 335 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 HNRNPH1P31943 449 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 CYP2C18P33260 490 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 RANBP1P43487 201 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 PIK3CGP48736 1102 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 ERFP50548 548 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 AQP5P55064 265 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 PPATQ06203 517 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 DDX39BQ13838 428 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 RRP1BQ14684 758 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 PLCL1Q15111 1095 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 CBWD3Q5JTY5 395 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 CBWD5Q5RIA9 395 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 RETSATQ6NUM9 610 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 KYAT3Q6YP21 454 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 PTAR1Q7Z6K3 402 aaPredicted RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 BRSK2Q8IWQ3 736 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 HASPINQ8TF76 798 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 KAT2BQ92831 832 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 LRRC39Q96DD0 335 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 KLHL28Q9NXS3 571 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 DLGAP2Q9P1A6 1054 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 NAALADL1Q9UQQ1 740 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 PDZK1P1A8MUH7 402 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 LACTBL1A8MY62 500 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 PSMD12O00232 456 aaPredicted RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 CBX4O00257 560 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 MAP3K6O95382 1288 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 SOX11P35716 441 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 TUBP50607 506 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 NAA20P61599 178 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 POU6F1Q14863 301 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 ATAD3BQ5T9A4 648 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 DSG4Q86SJ6 1040 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 ATXN2LQ8WWM7 1075 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 SKA1Q96BD8 255 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 TBL1YQ9BQ87 522 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 MRIQ9BWK5 157 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 IDI2Q9BXS1 227 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 CIPCQ9C0C6 399 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 IL25Q9H293 177 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 IL17RBQ9NRM6 502 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 NCKAP1Q9Y2A7 1128 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 POMCP01189 267 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 UBTFL6P0CB48 400 aaPredicted RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 PTPN4P29074 926 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 ADORA2AP29274 412 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 SERPINB3P29508 390 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 NOS2P35228 1153 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 PABPC1LQ4VXU2 614 aaKnown RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 ACTL9Q8TC94 416 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 FBXO25Q8TCJ0 367 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 C19orf60Q96EN9 201 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 TSPAN18Q96SJ8 248 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 ACTR8Q9H981 624 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 PARVBQ9HBI1 364 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 SYBUQ9NX95 663 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 ADGRB1O14514 1584 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 MROH7Q68CQ1 1323 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 RBAK-RBAKDNI3L0D1 243 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 RGS14O43566 566 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 VEGFAP15692 232 aaPredicted RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 IFNGR2P38484 337 aa6.63□□□□□ -1.35
LSAMP-207ENST00000539563 HIRAP54198 1017 aaPredicted RBP6.63□□□□□ -1.35
LSAMP-207ENST00000539563 SLC6A3Q01959 620 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms