RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 DMAP1Q9NPF5 467 aaPredicted RBP20.9■□□□□ 0.94
TMEM260-203ENST00000539559 XPNPEP3Q9NQH7 507 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 MKS1Q9NXB0 559 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 CLIC5Q9NZA1 410 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 TMEM216Q9P0N5 145 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 G3BP2Q9UN86 482 aaKnown RBP20.9■□□□□ 0.94
TMEM260-203ENST00000539559 GPR25O00155 361 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 ITGAXP20702 1163 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 ABCG1P45844 678 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 OLIG2Q13516 323 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 MAP7D3Q8IWC1 876 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 TNS4Q8IZW8 715 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 RTP4Q96DX8 246 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 CDT1Q9H211 546 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 RPF1Q9H9Y2 349 aaKnown RBP20.9■□□□□ 0.94
TMEM260-203ENST00000539559 IFT122Q9HBG6 1241 aa20.9■□□□□ 0.94
TMEM260-203ENST00000539559 IGKV6D-21A0A0A0MT36 114 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 BCLAF3A2AJT9 711 aaKnown RBP20.89■□□□□ 0.93
TMEM260-203ENST00000539559 CAPN8A6NHC0 703 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 E9PBE3 544 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 B4GALT4O60513 344 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 KLHL41O60662 606 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 PLIN3O60664 434 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 PRKCGP05129 697 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 UQCRBP14927 111 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 CYP2F1P24903 491 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 L1CAMP32004 1257 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 IREB2P48200 963 aaKnown RBP20.89■□□□□ 0.93
TMEM260-203ENST00000539559 ITGA9Q13797 1035 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 TBCCQ15814 346 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 C9orf131Q5VYM1 1079 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 KCNT2Q6UVM3 1135 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 ARCQ7LC44 396 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 DNAJB4Q9UDY4 337 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 MAGEA3P43357 314 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 CLCN3P51790 818 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 ATXN3P54252 364 aaPredicted RBP20.89■□□□□ 0.93
TMEM260-203ENST00000539559 HNRNPDQ14103 355 aaKnown RBP20.89■□□□□ 0.93
TMEM260-203ENST00000539559 PMF1Q6P1K2 205 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 CMC1Q7Z7K0 106 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 B4GALNT2Q8NHY0 566 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 DHX35Q9H5Z1 703 aaKnown RBP20.89■□□□□ 0.93
TMEM260-203ENST00000539559 FAM49BQ9NUQ9 324 aa20.89■□□□□ 0.93
TMEM260-203ENST00000539559 CCNT2O60583 730 aaKnown RBP20.88■□□□□ 0.93
TMEM260-203ENST00000539559 PFKMP08237 780 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 TBL3Q12788 808 aaKnown RBP20.88■□□□□ 0.93
TMEM260-203ENST00000539559 ACAP1Q15027 740 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 TREML2Q5T2D2 321 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 EZH1Q92800 747 aaPredicted RBP20.88■□□□□ 0.93
TMEM260-203ENST00000539559 NRDE2Q9H7Z3 1164 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 MYOCOSA0A1B0GUC4 107 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 ZBTB14O43829 449 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 PDK3Q15120 406 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 SLC9A4Q6AI14 798 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 AAGABQ6PD74 315 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 PACS1Q6VY07 963 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 HACE1Q8IYU2 909 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 CLEC4CQ8WTT0 213 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 CNKSR2Q8WXI2 1034 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 KCNN1Q92952 543 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 MOCS1Q9NZB8 636 aa20.88■□□□□ 0.93
TMEM260-203ENST00000539559 MAGED2Q9UNF1 606 aaPredicted RBP20.88■□□□□ 0.93
TMEM260-203ENST00000539559 YBX3P16989 372 aaKnown RBP eCLIP20.87■□□□□ 0.93
TMEM260-203ENST00000539559 TGM2P21980 687 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 MGAT1P26572 445 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 SURF1Q15526 300 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 PGM2L1Q6PCE3 622 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 CHST13Q8NET6 341 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 PTPRHQ9HD43 1115 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 ANK1P16157 1881 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 KLHL2O95198 593 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 ERVK-10P10266 1014 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 GOLGA7BQ2TAP0 167 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 ARHGAP22Q7Z5H3 698 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 MCUQ8NE86 351 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 LGMNQ99538 433 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 R3HDMLQ9H3Y0 253 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 INPP5FQ9Y2H2 1132 aa20.87■□□□□ 0.93
TMEM260-203ENST00000539559 LCTP09848 1927 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 SF3B1O75533 1304 aaKnown RBP eCLIP20.86■□□□□ 0.939e-6■■■■■ 68.9
TMEM260-203ENST00000539559 MLH1P40692 756 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 HDAC4P56524 1084 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 SLC5A9Q2M3M2 681 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 HSDL1Q3SXM5 330 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 IER5Q5VY09 327 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 PYROXD2Q8N2H3 581 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 RAB3IL1Q8TBN0 382 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 NAT14Q8WUY8 206 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 CPB2Q96IY4 423 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 GOLGA8QA0A0J9YX86 632 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 GOLGA8OA6NCC3 632 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 ZBTB42B2RXF5 422 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 GOLGA8NF8WBI6 632 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 H3BNX3 289 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 ZNF195O14628 629 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 PROZP22891 400 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 SERPINB9P50453 376 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 PGGT1BP53609 377 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 GK3PQ14409 553 aa20.86■□□□□ 0.93
TMEM260-203ENST00000539559 PDK2Q15119 407 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms