RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 SYN1P17600 705 aa11.48□□□□□ -0.57
CTCFL-212ENST00000539382 ERCC2P18074 760 aa11.48□□□□□ -0.57
CTCFL-212ENST00000539382 AIF1P55008 147 aa11.48□□□□□ -0.57
CTCFL-212ENST00000539382 ZSCAN26Q16670 478 aa11.48□□□□□ -0.57
CTCFL-212ENST00000539382 VPS52Q8N1B4 723 aa11.48□□□□□ -0.57
CTCFL-212ENST00000539382 UHMK1Q8TAS1 419 aaKnown RBP11.48□□□□□ -0.57
CTCFL-212ENST00000539382 RNF34Q969K3 372 aa11.48□□□□□ -0.57
CTCFL-212ENST00000539382 SIK2Q9H0K1 926 aa11.48□□□□□ -0.57
CTCFL-212ENST00000539382 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.48□□□□□ -0.57
CTCFL-212ENST00000539382 TPX2Q9ULW0 747 aaKnown RBP11.48□□□□□ -0.57
CTCFL-212ENST00000539382 MAGED2Q9UNF1 606 aaPredicted RBP11.48□□□□□ -0.57
CTCFL-212ENST00000539382 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
CTCFL-212ENST00000539382 BCLAF3A2AJT9 711 aaKnown RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 SLC38A8A6NNN8 435 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 KCNU1A8MYU2 1149 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 GOLGA8MH3BSY2 632 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 EFCAB14O75071 495 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 FGBP02675 491 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 VAV1P15498 845 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 LAG3P18627 525 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 STIP1P31948 543 aaKnown RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 ACTN2P35609 894 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 GLUD2P49448 558 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 HTRA4P83105 476 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 ZNF844Q08AG5 666 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 SMARCB1Q12824 385 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 MTM1Q13496 603 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 SLC29A2Q14542 456 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 TMEM240Q5SV17 173 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 LEKR1Q6ZMV7 388 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 ZNF461Q8TAF7 563 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 PRCCQ92733 491 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 RTP4Q96DX8 246 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 OXCT2Q9BYC2 517 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 PABPC3Q9H361 631 aaKnown RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 CCSER2Q9H7U1 834 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 KIAA1671Q9BY89 1806 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 CHD9Q3L8U1 2897 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 LCHNA4D1U4 455 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 BANF1O75531 89 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 SRGAP2BP0DMP2 458 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 RARGP13631 454 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 ZFXP17010 805 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 NR2C2P49116 596 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 TPI1P60174 286 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 EFEMP1Q12805 493 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 FASTKD3Q14CZ7 662 aaKnown RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 PAFAH1B3Q15102 231 aaKnown RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 ARL13BQ3SXY8 428 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 SLC45A4Q5BKX6 768 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 TTMPQ5BVD1 217 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 HP1BP3Q5SSJ5 553 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 MSANTD2Q6P1R3 559 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 DDX53Q86TM3 631 aaKnown RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 NAT8LQ8N9F0 302 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 CCDC110Q8TBZ0 833 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 CCHCR1Q8TD31 782 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 C2orf15Q8WU43 125 aaKnown RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 SLC39A13Q96H72 371 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 TRIM62Q9BVG3 475 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 FAM129AQ9BZQ8 928 aa11.47□□□□□ -0.57
CTCFL-212ENST00000539382 CDC42EP4Q9H3Q1 356 aaKnown RBP11.47□□□□□ -0.57
CTCFL-212ENST00000539382 GOLGA6CA6NDK9 693 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 RIPK2O43353 540 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 LILRB3O75022 631 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 FGF18O76093 207 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 TMEM63AO94886 807 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 RTN3O95197 1032 aaPredicted RBP11.46□□□□□ -0.57
CTCFL-212ENST00000539382 MOCS2O96007 188 aaPredicted RBP11.46□□□□□ -0.57
CTCFL-212ENST00000539382 ZDHHC11BP0C7U3 371 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 GOLGA6DP0CG33 693 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 HMGA1P17096 107 aaKnown RBP11.46□□□□□ -0.57
CTCFL-212ENST00000539382 EPHB2P29323 1055 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 CCR1P32246 355 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 RPL10AP62906 217 aaKnown RBP11.46□□□□□ -0.57
CTCFL-212ENST00000539382 FPGSQ05932 587 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 FAXCQ5TGI0 409 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 TMCO4Q5TGY1 634 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 SPRED2Q7Z698 418 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 C14orf80Q86SX3 495 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 MIB1Q86YT6 1006 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 C7orf61Q8IZ16 206 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 ZCCHC9Q8N567 271 aaKnown RBP11.46□□□□□ -0.57
CTCFL-212ENST00000539382 FCRL2Q96LA5 508 aaPredicted RBP11.46□□□□□ -0.57
CTCFL-212ENST00000539382 RUFY1Q96T51 708 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 HERC2P3Q9BVR0 1158 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 PRDM12Q9H4Q4 367 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 GOLGA6AQ9NYA3 693 aa11.46□□□□□ -0.57
CTCFL-212ENST00000539382 AFF4Q9UHB7 1163 aaKnown RBP11.46□□□□□ -0.57
CTCFL-212ENST00000539382 NUP205Q92621 2012 aa11.46□□□□□ -0.58
CTCFL-212ENST00000539382 SPATA31D3P0C874 917 aa11.46□□□□□ -0.58
CTCFL-212ENST00000539382 HCAR3P49019 387 aa11.46□□□□□ -0.58
CTCFL-212ENST00000539382 CAV1Q03135 178 aa11.46□□□□□ -0.58
CTCFL-212ENST00000539382 XRCC4Q13426 336 aa11.46□□□□□ -0.58
CTCFL-212ENST00000539382 MORF4L2Q15014 288 aa11.46□□□□□ -0.58
CTCFL-212ENST00000539382 KYNUQ16719 465 aa11.46□□□□□ -0.58
CTCFL-212ENST00000539382 MSS51Q4VC12 460 aa11.46□□□□□ -0.58
CTCFL-212ENST00000539382 CEP85LQ5SZL2 805 aa11.46□□□□□ -0.58
CTCFL-212ENST00000539382 FNBP1LQ5T0N5 605 aa11.46□□□□□ -0.58
CTCFL-212ENST00000539382 MANEALQ5VSG8 457 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms