RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 GRIK2Q13002 908 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 SLC14A1Q13336 389 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 MSANTD2Q6P1R3 559 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 TMEM270Q6UE05 265 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 LCLAT1Q6UWP7 414 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 SERPINA13PQ6UXR4 307 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 CACUL1Q86Y37 369 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.05□□□□□ -0.32
VAMP1-206ENST00000538970 CADM4Q8NFZ8 388 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 WFIKKN2Q8TEU8 576 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 TFAP2BQ92481 460 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 ZSWIM1Q9BR11 485 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
VAMP1-206ENST00000538970 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.05□□□□□ -0.32
VAMP1-206ENST00000538970 ADAMTS9Q9P2N4 1935 aa13.05□□□□□ -0.32
VAMP1-206ENST00000538970 ADAMTS20P59510 1910 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 A0A1B0GTW7 788 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 TIMM44O43615 452 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 GABBR2O75899 941 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 IGLV3-27P01718 113 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 HLA-EP13747 358 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 CD44P16070 742 aaKnown RBP13.04□□□□□ -0.32
VAMP1-206ENST00000538970 OXTRP30559 389 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 RGS7P49802 495 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 SGSHP51688 502 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 ARID5AQ03989 594 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 CAMK2GQ13555 558 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-206ENST00000538970 HNRNPDQ14103 355 aaKnown RBP13.04□□□□□ -0.32
VAMP1-206ENST00000538970 ADGRF1Q5T601 910 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 DCAF12L1Q5VU92 463 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 PMF1Q6P1K2 205 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 KIAA0907Q7Z7F0 614 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-206ENST00000538970 ZCCHC9Q8N567 271 aaKnown RBP13.04□□□□□ -0.32
VAMP1-206ENST00000538970 OR2T3Q8NH03 318 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 SLC35F5Q8WV83 523 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 IRGQQ8WZA9 623 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 KAT5Q92993 513 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 CEP63Q96MT8 703 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 TIGD1Q96MW7 591 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 NT5C1BQ96P26 610 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 BBC3Q96PG8 261 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-206ENST00000538970 ZDHHC5Q9C0B5 715 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 TMEM245Q9H330 911 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 GGA2Q9UJY4 613 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 CKAP5Q14008 2032 aa13.04□□□□□ -0.32
VAMP1-206ENST00000538970 METTL12A8MUP2 240 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 H0Y626 953 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 M0QYV0 167 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 PIK3R2O00459 728 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 TRIM16O95361 564 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 C7P10643 843 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 ACADMP11310 421 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 PABPC1P11940 636 aaKnown RBP13.03□□□□□ -0.32
VAMP1-206ENST00000538970 STIM1Q13586 685 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 PTPRNQ16849 979 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 CCDC40Q4G0X9 1142 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 FNDC3BQ53EP0 1204 aaKnown RBP13.03□□□□□ -0.32
VAMP1-206ENST00000538970 CHST9Q7L1S5 443 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 PDZD3Q86UT5 571 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 ADIPOR2Q86V24 386 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 NAXDQ8IW45 347 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 AHI1Q8N157 1196 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 PPM1KQ8N3J5 372 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 CLEC4CQ8WTT0 213 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 CYB5D2Q8WUJ1 264 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 TMA16Q96EY4 203 aaKnown RBP13.03□□□□□ -0.32
VAMP1-206ENST00000538970 DHTKD1Q96HY7 919 aaPredicted RBP13.03□□□□□ -0.32
VAMP1-206ENST00000538970 CAMK1GQ96NX5 476 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 NUP58Q9BVL2 599 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 MIR1-1HGQ9H1L0 117 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 ABCB8Q9NUT2 735 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 HOOK1Q9UJC3 728 aaKnown RBP13.03□□□□□ -0.32
VAMP1-206ENST00000538970 MSRB2Q9Y3D2 182 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 GPSM3Q9Y4H4 160 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 PCDHB4Q9Y5E5 795 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 IGSF10Q6WRI0 2623 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 PI4KAP42356 2102 aa13.03□□□□□ -0.32
VAMP1-206ENST00000538970 CACNA1EQ15878 2313 aa13.02□□□□□ -0.32
VAMP1-206ENST00000538970 CYSRT1A8MQ03 144 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 RNF225M0QZC1 329 aaPredicted RBP13.02□□□□□ -0.33
VAMP1-206ENST00000538970 P4HA2O15460 535 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 SH3BP5O60239 455 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 CALCAP01258 141 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 LTFP02788 710 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 CAPNS1P04632 268 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 BRD2P25440 801 aaKnown RBP13.02□□□□□ -0.33
VAMP1-206ENST00000538970 PPP1R2P41236 205 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 STILQ15468 1287 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 CNGA2Q16280 664 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 ZNF423Q2M1K9 1284 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 FAM133BQ5BKY9 247 aaKnown RBP13.02□□□□□ -0.33
VAMP1-206ENST00000538970 MPP7Q5T2T1 576 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 NUGGCQ68CJ6 796 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 ISM2Q6H9L7 571 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 TTI2Q6NXR4 508 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 RFWD3Q6PCD5 774 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 FAM124AQ86V42 546 aa13.02□□□□□ -0.33
VAMP1-206ENST00000538970 ELOA2Q8IYF1 753 aaPredicted RBP13.02□□□□□ -0.33
VAMP1-206ENST00000538970 ZNF366Q8N895 744 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms