RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 PCDHGA11Q9Y5H2 935 aa5.41□□□□□ -1.54
LINC02408-202ENST00000538573 CEP290O15078 2479 aa5.41□□□□□ -1.54
LINC02408-202ENST00000538573 CCDC66A2RUB6 948 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 MIF4GDA9UHW6 222 aaKnown RBP5.4□□□□□ -1.54
LINC02408-202ENST00000538573 M0QYT0 321 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 CCL16O15467 120 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 PRPSAP2O60256 369 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 FYNP06241 537 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 MYL4P12829 197 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 RARGP13631 454 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 HMGA1P17096 107 aaKnown RBP5.4□□□□□ -1.54
LINC02408-202ENST00000538573 TFE3P19532 575 aaPredicted RBP5.4□□□□□ -1.54
LINC02408-202ENST00000538573 MIPP30301 263 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 CXCR5P32302 372 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 GBP1P32455 592 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 MAN1A1P33908 653 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 PTPN9P43378 593 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 PGFP49763 221 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 TAS2R40P59535 323 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 DEUP1Q05D60 604 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 NME3Q13232 169 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 ACAP1Q15027 740 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 HADHQ16836 314 aaKnown RBP5.4□□□□□ -1.54
LINC02408-202ENST00000538573 SLC25A52Q3SY17 297 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 RAB6CQ53S08 254 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 ODF2Q5BJF6 829 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 C10orf120Q5SQS8 335 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 ELMSAN1Q6PJG2 1045 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 SND1Q7KZF4 910 aaKnown RBP eCLIP5.4□□□□□ -1.54
LINC02408-202ENST00000538573 RSRC2Q7L4I2 434 aaKnown RBP5.4□□□□□ -1.54
LINC02408-202ENST00000538573 BHLHA9Q7RTU4 235 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 RHOT1Q8IXI2 618 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 SDR16C5Q8N3Y7 309 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 OTUD6BQ8N6M0 293 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 ARFGAP1Q8N6T3 406 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 NIPA2Q8N8Q9 360 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 PDZD8Q8NEN9 1154 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 FNIP1Q8TF40 1166 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 FAM172AQ8WUF8 416 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 SLC22A17Q8WUG5 538 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 RNF34Q969K3 372 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 PPP2R3CQ969Q6 453 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 MRPL38Q96DV4 380 aaKnown RBP5.4□□□□□ -1.54
LINC02408-202ENST00000538573 HES6Q96HZ4 224 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 CEP295NLQ96MC4 621 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 SLC2A13Q96QE2 648 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 TBCBQ99426 244 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 PSMB7Q99436 277 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 TTLL2Q9BWV7 592 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 TLR10Q9BXR5 811 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 NACA2Q9H009 215 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 RAB6CQ9H0N0 254 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 PLEKHA4Q9H4M7 779 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 PRDM12Q9H4Q4 367 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 FAM204AQ9H8W3 233 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 ZWILCHQ9H900 591 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 MAN1C1Q9NR34 630 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 OSER1Q9NX31 292 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.4□□□□□ -1.54
LINC02408-202ENST00000538573 IL37Q9NZH6 218 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 TRPM5Q9NZQ8 1165 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 UXTQ9UBK9 157 aaPredicted RBP5.4□□□□□ -1.54
LINC02408-202ENST00000538573 PCSK1NQ9UHG2 260 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 DPP7Q9UHL4 492 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 NUDT5Q9UKK9 219 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.4□□□□□ -1.54
LINC02408-202ENST00000538573 ASB3Q9Y575 518 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 PCDHA3Q9Y5H8 950 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 SAR1BQ9Y6B6 198 aa5.4□□□□□ -1.54
LINC02408-202ENST00000538573 ATG2AQ2TAZ0 1938 aa5.4□□□□□ -1.55
LINC02408-202ENST00000538573 CCDC195A0A1B0GUA6 201 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 FAM92AA1XBS5 289 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 SERTM1A2A2V5 107 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 KCNK3O14649 394 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 FANCGO15287 622 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 DDX3YO15523 660 aaKnown RBP5.39□□□□□ -1.55
LINC02408-202ENST00000538573 CEP104O60308 925 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 SRGAP2O75044 1071 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 LRCH4O75427 683 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 RFPL2O75678 378 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 ZRANB2O95218 330 aaKnown RBP eCLIP5.39□□□□□ -1.55
LINC02408-202ENST00000538573 TRUB2O95900 331 aaKnown RBP5.39□□□□□ -1.55
LINC02408-202ENST00000538573 C1RP00736 705 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 F9P00740 461 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 KRT7P08729 469 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 TCF4P15884 667 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 PRLRP16471 622 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 PTPN2P17706 415 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 TCP1P17987 556 aaKnown RBP5.39□□□□□ -1.55
LINC02408-202ENST00000538573 CTNNA2P26232 953 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 CALRP27797 417 aaKnown RBP5.39□□□□□ -1.55
LINC02408-202ENST00000538573 CTNNA1P35221 906 aaKnown RBP5.39□□□□□ -1.55
LINC02408-202ENST00000538573 GTF2F1P35269 517 aaKnown RBP eCLIP5.39□□□□□ -1.55
LINC02408-202ENST00000538573 PCK1P35558 622 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 PPP3CCP48454 512 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 MARCKSL1P49006 195 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 ATXN1P54253 815 aaKnown RBP5.39□□□□□ -1.55
LINC02408-202ENST00000538573 RWDD2BP57060 319 aa5.39□□□□□ -1.55
LINC02408-202ENST00000538573 PITX1P78337 314 aaPredicted RBP5.39□□□□□ -1.55
LINC02408-202ENST00000538573 EFEMP1Q12805 493 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms