RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 MED12LQ86YW9 2145 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 MREGQ8N565 214 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 FBXO36Q8NEA4 188 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 MTMR8Q96EF0 704 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 MOV10Q9HCE1 1003 aaKnown RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 TRMT6Q9UJA5 497 aaKnown RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CROTQ9UKG9 612 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CAMSAP1Q5T5Y3 1602 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CNPP09543 421 aaKnown RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 FDFT1P37268 417 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 OLR1P78380 273 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CYP4Z2PQ8N1L4 340 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 DLG3Q92796 817 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 APOL5Q9BWW9 433 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CPSF1Q10570 1443 aaKnown RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CEP170Q5SW79 1584 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 GLRA3O75311 464 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 PABPC1P11940 636 aaKnown RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 GARTP22102 1010 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 BNC1Q01954 994 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 DDB1Q16531 1140 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 DUOXA2Q1HG44 320 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 CYP4V2Q6ZWL3 525 aaPredicted RBP5.8□□□□□ -1.48
CSMD1-215ENST00000537824 SLC20A1Q8WUM9 679 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 RSAD1Q9HA92 442 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 TOR4AQ9NXH8 423 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 MED14O60244 1454 aa5.8□□□□□ -1.48
CSMD1-215ENST00000537824 EXTL3O43909 919 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 RLN1P04808 185 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ITGA2BP08514 1039 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 PAGE2BQ5JRK9 111 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CREG2Q8IUH2 290 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 KRT78Q8N1N4 520 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CNKSR1Q969H4 720 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 SEC31BQ9NQW1 1179 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 KLHL1Q9NR64 748 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 LATS2Q9NRM7 1088 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 AP4B1Q9Y6B7 739 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 KLHL33A6NCF5 533 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 TNPO2O14787 897 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 PDE8BO95263 885 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 PURAQ00577 322 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 RAD51Q06609 339 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 PRKAA1Q13131 559 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CA9Q16790 459 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 TMEM53Q6P2H8 277 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CENPIQ92674 756 aaPredicted RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 UCKL1Q9NWZ5 548 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 SHOC2Q9UQ13 582 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 E7ENX8 843 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CYP4B1P13584 511 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 FAAP100Q0VG06 881 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ORC2Q13416 577 aaPredicted RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF544Q6NX49 715 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 MCPH1Q8NEM0 835 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 TFB1MQ8WVM0 346 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 GFM1Q96RP9 751 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 THAP2Q9H0W7 228 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 FAM217BQ9NTX9 383 aaPredicted RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 SLC8A2Q9UPR5 921 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 SMCHD1A6NHR9 2005 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 KATNA1O75449 491 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CAPZA2P47755 286 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 MTX3Q5HYI7 312 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ANKS3Q6ZW76 656 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 PI4K2AQ9BTU6 479 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CDH9Q9ULB4 789 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 OGDHLQ9ULD0 1010 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ABCC10Q5T3U5 1492 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ZMYM2Q9UBW7 1377 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 FARP2O94887 1054 aaPredicted RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 PSEN1P49768 467 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CYP4F2P78329 520 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 HPCAP84074 193 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 XIAPP98170 497 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CYP4F3Q08477 520 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 THNSL1Q8IYQ7 743 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 EIF2AK1Q9BQI3 630 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 SIK2Q9H0K1 926 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 GPR108Q9NPR9 543 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 HAT1O14929 419 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 MSL3P1P0C860 447 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CHI3L1P36222 383 aaPredicted RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 GRIK1P39086 918 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 MCAMP43121 646 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 JAK3P52333 1124 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ATP13A5Q4VNC0 1218 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ARMCX2Q7L311 632 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 ALYREFQ86V81 257 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 C10orf53Q8N6V4 93 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 MRPL48Q96GC5 212 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 CREBBPQ92793 2442 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 FAM240BA0A1B0GVZ2 78 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 GTF2H1P32780 548 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 TPTEP56180 551 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 STX4Q12846 297 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 NFX1Q12986 1120 aaKnown RBP5.79□□□□□ -1.48
CSMD1-215ENST00000537824 Q3C1V9 767 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 SYTL3Q4VX76 610 aa5.79□□□□□ -1.48
CSMD1-215ENST00000537824 PTAR1Q7Z6K3 402 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms