RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 PHACTR1Q9C0D0 580 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 ABI2Q9NYB9 513 aaPredicted RBP18.01■□□□□ 0.47
SNX17-210ENST00000537606 ACTL7BQ9Y614 415 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 CCT8L1PA6NM43 557 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 ARVCFO00192 962 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 PM20D1Q6GTS8 502 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 FAM47EQ6ZV65 393 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 LRRC8DQ7L1W4 858 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 CEP57Q86XR8 500 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 COLGALT2Q8IYK4 626 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 NSRP1Q9H0G5 558 aaKnown RBP18.01■□□□□ 0.47
SNX17-210ENST00000537606 C12orf65Q9H3J6 166 aaKnown RBP18.01■□□□□ 0.47
SNX17-210ENST00000537606 ABCF3Q9NUQ8 709 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 HCSTQ9UBK5 93 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 SLC24A2Q9UI40 661 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 GRID1Q9ULK0 1009 aa18.01■□□□□ 0.47
SNX17-210ENST00000537606 GOLGA8RI6L899 631 aa18■□□□□ 0.47
SNX17-210ENST00000537606 KCNK1O00180 336 aa18■□□□□ 0.47
SNX17-210ENST00000537606 DCLK1O15075 740 aa18■□□□□ 0.47
SNX17-210ENST00000537606 CAPN15O75808 1086 aa18■□□□□ 0.47
SNX17-210ENST00000537606 CPP00450 1065 aa18■□□□□ 0.47
SNX17-210ENST00000537606 SLC5A3P53794 718 aa18■□□□□ 0.47
SNX17-210ENST00000537606 TPI1P60174 286 aa18■□□□□ 0.47
SNX17-210ENST00000537606 DSC1Q08554 894 aa18■□□□□ 0.47
SNX17-210ENST00000537606 KBTBD12Q3ZCT8 623 aa18■□□□□ 0.47
SNX17-210ENST00000537606 PPP1R21Q6ZMI0 780 aa18■□□□□ 0.47
SNX17-210ENST00000537606 ANKS4BQ8N8V4 417 aa18■□□□□ 0.47
SNX17-210ENST00000537606 SLC43A3Q8NBI5 491 aa18■□□□□ 0.47
SNX17-210ENST00000537606 COLGALT1Q8NBJ5 622 aa18■□□□□ 0.47
SNX17-210ENST00000537606 DBF4BQ8NFT6 615 aa18■□□□□ 0.47
SNX17-210ENST00000537606 DEPDC1BQ8WUY9 529 aa18■□□□□ 0.47
SNX17-210ENST00000537606 PGLYRP2Q96PD5 576 aa18■□□□□ 0.47
SNX17-210ENST00000537606 SLC9A7Q96T83 725 aa18■□□□□ 0.47
SNX17-210ENST00000537606 TSEN34Q9BSV6 310 aaKnown RBP18■□□□□ 0.47
SNX17-210ENST00000537606 MAD1L1Q9Y6D9 718 aa18■□□□□ 0.47
SNX17-210ENST00000537606 NUP205Q92621 2012 aa18■□□□□ 0.47
SNX17-210ENST00000537606 RNF103O00237 685 aa18■□□□□ 0.47
SNX17-210ENST00000537606 HGSO14964 777 aaPredicted RBP18■□□□□ 0.47
SNX17-210ENST00000537606 NBNO60934 754 aa18■□□□□ 0.47
SNX17-210ENST00000537606 ATP2A2P16615 1042 aaKnown RBP18■□□□□ 0.47
SNX17-210ENST00000537606 MSH2P43246 934 aa18■□□□□ 0.47
SNX17-210ENST00000537606 GPR15P49685 360 aa18■□□□□ 0.47
SNX17-210ENST00000537606 VEGFBP49765 207 aa18■□□□□ 0.47
SNX17-210ENST00000537606 CGB2Q6NT52 195 aa18■□□□□ 0.47
SNX17-210ENST00000537606 ZNF534Q76KX8 674 aa18■□□□□ 0.47
SNX17-210ENST00000537606 REM2Q8IYK8 340 aaPredicted RBP18■□□□□ 0.47
SNX17-210ENST00000537606 DQX1Q8TE96 717 aaKnown RBP18■□□□□ 0.47
SNX17-210ENST00000537606 THOC1Q96FV9 657 aaKnown RBP18■□□□□ 0.47
SNX17-210ENST00000537606 FAM193BQ96PV7 902 aaPredicted RBP18■□□□□ 0.47
SNX17-210ENST00000537606 SMC6Q96SB8 1091 aa18■□□□□ 0.47
SNX17-210ENST00000537606 ZC3H7BQ9UGR2 993 aaKnown RBP18■□□□□ 0.47
SNX17-210ENST00000537606 SFMBT1Q9UHJ3 866 aa18■□□□□ 0.47
SNX17-210ENST00000537606 PCDHB8Q9UN66 801 aa18■□□□□ 0.47
SNX17-210ENST00000537606 A0A0A0MRY4 1105 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 KRT4P19013 534 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 TAC1P20366 129 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 SCTRP47872 440 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 FAM189BP81408 668 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 GPNMBQ14956 572 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 SLC1A5Q15758 541 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 BZW1Q7L1Q6 419 aaKnown RBP17.99■□□□□ 0.47
SNX17-210ENST00000537606 NPWQ8N729 165 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 PDCD7Q8N8D1 485 aaKnown RBP17.99■□□□□ 0.47
SNX17-210ENST00000537606 URGCPQ8TCY9 931 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 DCAKDQ8WVC6 231 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 NTAN1Q96AB6 310 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 SPATA13Q96N96 652 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 CFHR5Q9BXR6 569 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 SIK2Q9H0K1 926 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 OR12D3Q9UGF7 316 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 TADA2AO75478 443 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 FAM155BO75949 473 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 ASMTLO95671 621 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 OAS1P00973 400 aaKnown RBP17.99■□□□□ 0.47
SNX17-210ENST00000537606 SRGAP2BP0DMP2 458 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 TYMPP19971 482 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 CA4P22748 312 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 SEMA3BQ13214 749 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 DDR2Q16832 855 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 KLHL38Q2WGJ6 581 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 ARL13BQ3SXY8 428 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 ADGRD1Q6QNK2 874 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 DENND1AQ8TEH3 1009 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 PGAP3Q96FM1 320 aaPredicted RBP17.99■□□□□ 0.47
SNX17-210ENST00000537606 MAGEB18Q96M61 343 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 PLAC1Q9HBJ0 212 aa17.99■□□□□ 0.47
SNX17-210ENST00000537606 TET1Q8NFU7 2136 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 HACD1B0YJ81 288 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 INPPL1O15357 1258 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 MSI1O43347 362 aaKnown RBP17.98■□□□□ 0.47
SNX17-210ENST00000537606 EPHB2P29323 1055 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 MAGEA6P43360 314 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 CXCR3P49682 368 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 CRADDP78560 199 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 WASHC5Q12768 1159 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 ITIH4Q14624 930 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 PAFAH1B3Q15102 231 aaKnown RBP17.98■□□□□ 0.47
SNX17-210ENST00000537606 PDK1Q15118 436 aa17.98■□□□□ 0.47
SNX17-210ENST00000537606 PRKD1Q15139 912 aaPredicted RBP17.98■□□□□ 0.47
SNX17-210ENST00000537606 MAPRE1Q15691 268 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms