RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 MRPS15P82914 257 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 STK11Q15831 433 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 CALCRLQ16602 461 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 HIF1AQ16665 826 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 CEP55Q53EZ4 464 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 SLFN13Q68D06 897 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 KIAA0408Q6ZU52 694 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 OTOP3Q7RTS5 596 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 DSG4Q86SJ6 1040 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 ZBTB46Q86UZ6 589 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 LCORLQ8N3X6 602 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC4A11Q8NBS3 891 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 FLAD1Q8NFF5 587 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 BHLHE22Q8NFJ8 381 aaPredicted RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 PNPT1Q8TCS8 783 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 SYTL2Q9HCH5 934 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 C8orf4Q9NR00 106 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 PKD2L1Q9P0L9 805 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 KLQ9UEF7 1012 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 VPS28Q9UK41 221 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 EIF3LQ9Y262 564 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 PCDHA2Q9Y5H9 948 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 TMEM2Q9UHN6 1383 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 TOPAZ1Q8N9V7 1692 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 ARPC4-TTLL3A0A0A6YYG9 625 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 DENND3A2RUS2 1198 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 SMCO2A6NFE2 343 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 SNNO75324 88 aaPredicted RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 INHBAP08476 426 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 COX4I1P13073 169 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 RPL17P18621 184 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 ECE1P42892 770 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 PHKA1P46020 1223 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 LEPRP48357 1165 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 GPX6P59796 221 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 PRAMEP78395 509 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 KNOP1Q1ED39 458 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 TMEM119Q4V9L6 283 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 CYP4A22Q5TCH4 519 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 BNC2Q6ZN30 1099 aaPredicted RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 ARCQ7LC44 396 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 CAND1Q86VP6 1230 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 CCDC60Q8IWA6 550 aaPredicted RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 PALM2Q8IXS6 379 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 ZCCHC7Q8N3Z6 543 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 TFB1MQ8WVM0 346 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 OMA1Q96E52 524 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 TMEM121Q9BTD3 319 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 MKRN2Q9H000 416 aaKnown RBP8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 APEX2Q9UBZ4 518 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 SERPINB13Q9UIV8 391 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 CFL2Q9Y281 166 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 PCDHB4Q9Y5E5 795 aa8.75□□□□□ -1.01
SRGAP1-202ENST00000537556 HTRA2O43464 458 aaPredicted RBP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 AKAP3O75969 853 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 GSNP06396 782 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 NCAM1P13591 858 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 TSHRP16473 764 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 ADSSP30520 456 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 KCNQ4P56696 695 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 IKQ13123 557 aaPredicted RBP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 TEX44Q53QW1 395 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 PDPK2PQ6A1A2 396 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 C16orf46Q6P387 395 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 HEATR3Q7Z4Q2 680 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 PCGF5Q86SE9 256 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC22A16Q86VW1 577 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 CELF1Q92879 486 aaKnown RBP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 DEPDC7Q96QD5 511 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 APOL6Q9BWW8 343 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 EMILIN2Q9BXX0 1053 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 DHX33Q9H6R0 707 aaKnown RBP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 ATP13A2Q9NQ11 1180 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 XPNPEP1Q9NQW7 623 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 BARHL2Q9NY43 387 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 DNMT3BQ9UBC3 853 aaKnown RBP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 COPG2Q9UBF2 871 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 AKAP11Q9UKA4 1901 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 STRCP1A6NGW2 1772 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 COL22A1Q8NFW1 1626 aaPredicted RBP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 A0A0B4J269 797 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 TEX51A0A1B0GUA7 166 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 AURKAO14965 403 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 NADKO95544 446 aaPredicted RBP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 SSTR1P30872 391 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 L1CAMP32004 1257 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 PRKAA2P54646 552 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 RAD23AP54725 363 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 VAC14Q08AM6 782 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 TUBB3Q13509 450 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 CDK10Q15131 360 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 DLG2Q15700 870 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 DUSP7Q16829 419 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 MAMSTRQ6ZN01 415 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 KCTD8Q6ZWB6 473 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 FKBP9P1Q75LS8 142 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 GLRX5Q86SX6 157 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 MAP6Q96JE9 813 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms