RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 GRPEL2Q8TAA5 225 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 NRG4Q8WWG1 115 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ALG3Q92685 438 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 FAM162AQ96A26 154 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 BFARQ9NZS9 450 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 FAM25AB3EWG3 89 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 FAM25CB3EWG5 89 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 FAM25GB3EWG6 89 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 TCP10L2B9ZVM9 353 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 FAM47E-STBD1D6RA91 191 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SLC1A6P48664 564 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 PRKAA2P54646 552 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 NAB1Q13506 487 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 MAPK6Q16659 721 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 QRICH1Q2TAL8 776 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ZNF699Q32M78 642 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ARL13BQ3SXY8 428 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SLX4IPQ5VYV7 408 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ITPRIPL1Q6GPH6 555 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 TTC23LQ6PF05 361 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 LRP10Q7Z4F1 713 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 TTC30AQ86WT1 665 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 OR8H2Q8N162 312 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 REXO4Q9GZR2 422 aaKnown RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ZNF277Q9NRM2 450 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 TAS2R14Q9NYV8 317 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 IL20Q9NYY1 176 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 IFT52Q9Y366 437 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 FUOMA2VDF0 154 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 CAPN8A6NHC0 703 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SNAP91O60641 907 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 RNASEH1O60930 286 aaKnown RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ZC3H11AO75152 810 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 CYP1A2P05177 515 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 PDGFRBP09619 1106 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 FCGR1AP12314 374 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 PSMB9P28065 219 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 MARCKSL1P49006 195 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 PPM1FP49593 454 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ST13P50502 369 aaKnown RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 RAD23AP54725 363 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 CARTPTQ16568 116 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 DOK7Q18PE1 504 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 N4BP2L1Q5TBK1 243 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 DENND5BQ6ZUT9 1274 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 CDH24Q86UP0 819 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SLC7A3Q8WY07 619 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 PIGBQ92521 554 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SCN3BQ9NY72 215 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 NARFQ9UHQ1 456 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SAGE2PA6NJ88 616 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SPDYE16A6NNV3 312 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 TSTA3Q13630 321 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 HERC3Q15034 1050 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 TRIM71Q2Q1W2 868 aaKnown RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SPDYE2Q495Y8 402 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SPATS1Q496A3 300 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 KCNT1Q5JUK3 1230 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ACAD10Q6JQN1 1059 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SPOCD1Q6ZMY3 1216 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 FKBP9P1Q75LS8 142 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 KDELC2Q7Z4H8 507 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ITIH5Q86UX2 942 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 KATNAL2Q8IYT4 538 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 LNX1Q8TBB1 728 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 DCPSQ96C86 337 aaKnown RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 FAM20AQ96MK3 541 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 KCTD10Q9H3F6 313 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 MYH3P11055 1940 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 RNF103O00237 685 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 TFAP2AP05549 437 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 RBP3P10745 1247 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ETS1P14921 441 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ALOX12P18054 663 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 PTPN7P35236 360 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 HIRAP54198 1017 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 IL17AQ16552 155 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ATG14Q6ZNE5 492 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SULF1Q8IWU6 871 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 FBXW8Q8N3Y1 598 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 BANPQ8N9N5 519 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SPATA18Q8TC71 538 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ELMO3Q96BJ8 720 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 DCUN1D1Q96GG9 259 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 NSMCE3Q96MG7 304 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 DEPDC7Q96QD5 511 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 DGCR6LQ9BY27 220 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 RBM38Q9H0Z9 239 aaKnown RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SLC39A10Q9ULF5 831 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 CCDC88AQ3V6T2 1871 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 A0A1W2PPM1 405 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SLCO1B7G3V0H7 640 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 M0R2N6 131 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 SNX2O60749 519 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 PIAS1O75925 651 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 AKAP3O75969 853 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 RRM1P23921 792 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 GNL1P36915 607 aaPredicted RBP5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ARPP19P56211 112 aa5.53□□□□□ -1.52
PTPRD-213ENST00000537002 ACTR2P61160 394 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms