RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 ZNF784Q8NCA9 323 aaPredicted RBP23.42■■□□□ 1.34
HMGA2-206ENST00000536545 C8orf48Q96LL4 319 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 EPAS1Q99814 870 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 DHRS4Q9BTZ2 278 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 PRDM12Q9H4Q4 367 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 HCSTQ9UBK5 93 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 SNX10Q9Y5X0 201 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 NR2E3Q9Y5X4 410 aa23.42■■□□□ 1.34
HMGA2-206ENST00000536545 TMEM120BA0PK00 339 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 GMNCA6NCL1 334 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 POC1B-GALNT4F8VUJ3 575 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 RNF103O00237 685 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 HOXA2O43364 376 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 FAM107AO95990 144 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 MYCP01106 439 aaPredicted RBP23.41■■□□□ 1.34
HMGA2-206ENST00000536545 CXCL10P02778 98 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 FGFR3P22607 806 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 MAGEA11P43364 429 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 IFRD2Q12894 506 aaPredicted RBP23.41■■□□□ 1.34
HMGA2-206ENST00000536545 NR1H3Q13133 447 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 EFTUD2Q15029 972 aaKnown RBP eCLIP23.41■■□□□ 1.346e-8■□□□□ 10.7
HMGA2-206ENST00000536545 KLHL38Q2WGJ6 581 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 ANKRD20A2Q5SQ80 823 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 ANKRD20A1Q5TYW2 823 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 ANKRD20A3Q5VUR7 823 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 C3orf62Q6ZUJ4 267 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 PALM2Q8IXS6 379 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 FBF1Q8TES7 1133 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 P2RY11Q96G91 374 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 CCT8L2Q96SF2 557 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 GPR62Q9BZJ7 368 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 INTS9Q9NV88 658 aaKnown RBP23.41■■□□□ 1.34
HMGA2-206ENST00000536545 ARHGEF38Q9NXL2 777 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 PSMC3IPQ9P2W1 217 aaPredicted RBP23.41■■□□□ 1.34
HMGA2-206ENST00000536545 LRFN2Q9ULH4 789 aa23.41■■□□□ 1.34
HMGA2-206ENST00000536545 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.4■■□□□ 1.34
HMGA2-206ENST00000536545 OR6C75A6NL08 312 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 OPHN1O60890 802 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 AVILO75366 819 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 CCT5P48643 541 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 CTXN3Q4LDR2 81 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 FAM171A1Q5VUB5 890 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 BTBD8Q5XKL5 378 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 ZNF280DQ6N043 979 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 TRABD2AQ86V40 505 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 TP53INP2Q8IXH6 220 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 NPWQ8N729 165 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 ZNF473Q8WTR7 871 aaKnown RBP23.4■■□□□ 1.34
HMGA2-206ENST00000536545 CCDC134Q9H6E4 229 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 NMUR1Q9HB89 426 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 NEU3Q9UQ49 428 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 TRIM66O15016 1216 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 SPAG6O75602 509 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 ZNF189O75820 626 aaPredicted RBP23.4■■□□□ 1.34
HMGA2-206ENST00000536545 STK10O94804 968 aaKnown RBP23.4■■□□□ 1.34
HMGA2-206ENST00000536545 CCL5P13501 91 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 FDFT1P37268 417 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 GEMIN4P57678 1058 aaKnown RBP23.4■■□□□ 1.34
HMGA2-206ENST00000536545 AP1B1Q10567 949 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 WASHC5Q12768 1159 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 DENND5BQ6ZUT9 1274 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 PDZD4Q76G19 769 aaPredicted RBP23.4■■□□□ 1.34
HMGA2-206ENST00000536545 SRRM1Q8IYB3 904 aaKnown RBP23.4■■□□□ 1.34
HMGA2-206ENST00000536545 MRPL9Q9BYD2 267 aaKnown RBP23.4■■□□□ 1.34
HMGA2-206ENST00000536545 OSBPL2Q9H1P3 480 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 OR12D3Q9UGF7 316 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 PRDM4Q9UKN5 801 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 SCML2Q9UQR0 700 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 PCDHB5Q9Y5E4 795 aa23.4■■□□□ 1.34
HMGA2-206ENST00000536545 LRIG2O94898 1065 aa23.39■■□□□ 1.33
HMGA2-206ENST00000536545 BRAFP15056 766 aa23.39■■□□□ 1.33
HMGA2-206ENST00000536545 ATP2A2P16615 1042 aaKnown RBP23.39■■□□□ 1.33
HMGA2-206ENST00000536545 CYP2C18P33260 490 aa23.39■■□□□ 1.33
HMGA2-206ENST00000536545 GPR15P49685 360 aa23.39■■□□□ 1.33
HMGA2-206ENST00000536545 BRMS1LQ5PSV4 323 aa23.39■■□□□ 1.33
HMGA2-206ENST00000536545 ANKRD33Q7Z3H0 272 aa23.39■■□□□ 1.33
HMGA2-206ENST00000536545 SCLYQ96I15 445 aa23.39■■□□□ 1.33
HMGA2-206ENST00000536545 TMEM175Q9BSA9 504 aa23.39■■□□□ 1.33
HMGA2-206ENST00000536545 A0A1W2PQH9 124 aa23.38■■□□□ 1.33
HMGA2-206ENST00000536545 RASA4BC9J798 803 aa23.38■■□□□ 1.33
HMGA2-206ENST00000536545 RASA4O43374 803 aa23.38■■□□□ 1.33
HMGA2-206ENST00000536545 FUT10Q6P4F1 479 aa23.38■■□□□ 1.33
HMGA2-206ENST00000536545 NUP93Q8N1F7 819 aa23.38■■□□□ 1.33
HMGA2-206ENST00000536545 CASP10Q92851 521 aa23.38■■□□□ 1.33
HMGA2-206ENST00000536545 LRRC39Q96DD0 335 aa23.38■■□□□ 1.33
HMGA2-206ENST00000536545 B3GALT6Q96L58 329 aa23.38■■□□□ 1.33
HMGA2-206ENST00000536545 FERMT1Q9BQL6 677 aa23.38■■□□□ 1.33
HMGA2-206ENST00000536545 RNF208Q9H0X6 261 aa23.38■■□□□ 1.33
HMGA2-206ENST00000536545 HIPK3Q9H422 1215 aa23.38■■□□□ 1.33
HMGA2-206ENST00000536545 EIF2B3Q9NR50 452 aaKnown RBP23.38■■□□□ 1.33
HMGA2-206ENST00000536545 TCRBV9S1A1TA0A576 114 aa23.37■■□□□ 1.33
HMGA2-206ENST00000536545 PPIDQ08752 370 aaKnown RBP23.37■■□□□ 1.33
HMGA2-206ENST00000536545 MPP2Q14168 576 aa23.37■■□□□ 1.33
HMGA2-206ENST00000536545 SDHAF4Q5VUM1 108 aa23.37■■□□□ 1.33
HMGA2-206ENST00000536545 CEP57Q86XR8 500 aa23.37■■□□□ 1.33
HMGA2-206ENST00000536545 TTC9BQ8N6N2 239 aa23.37■■□□□ 1.33
HMGA2-206ENST00000536545 STKLD1Q8NE28 680 aa23.37■■□□□ 1.33
HMGA2-206ENST00000536545 RNF34Q969K3 372 aa23.37■■□□□ 1.33
HMGA2-206ENST00000536545 PAFAH2Q99487 392 aa23.37■■□□□ 1.33
HMGA2-206ENST00000536545 PLAC1Q9HBJ0 212 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms