RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ABL2P42684 1182 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 RCN1Q15293 331 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 FASTKD1Q53R41 847 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 TRIM68Q6AZZ1 485 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 WDR75Q8IWA0 830 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 LMNTD2Q8IXW0 634 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 SLC2A14Q8TDB8 520 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 WDR60Q8WVS4 1066 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 ARNTL2Q8WYA1 636 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 TNIP3Q96KP6 325 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 TSPAN18Q96SJ8 248 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 RALGAPA2Q2PPJ7 1873 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 GLRA3O75311 464 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 RECQL4O94761 1208 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 ALDOAP04075 364 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 ENO1P06733 434 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 MMP3P08254 477 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 TMEM62Q0P6H9 643 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 PDK1Q15118 436 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 SNX30Q5VWJ9 437 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 PACS1Q6VY07 963 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 LIMS2Q7Z4I7 341 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 FAM131BQ86XD5 332 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 DEFB106AQ8N104 65 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 APPL2Q8NEU8 664 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 PPP1R14CQ8TAE6 165 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 PIWIL2Q8TC59 973 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 NT5C3BQ969T7 300 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 P2RY11Q96G91 374 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 ZNF560Q96MR9 790 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 RILPQ96NA2 401 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 CCDC106Q9BWC9 280 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 C1orf21Q9H246 121 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 STN1Q9H668 368 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 MFHAS1Q9Y4C4 1052 aa16.5■□□□□ 0.23
CHMP1A-202ENST00000535997 SMIM28A0A1B0GU29 152 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 H3BRJ5 948 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 CAPN9O14815 690 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 XPO1O14980 1071 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 NVLO15381 856 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 SMPD1P17405 629 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 INSCQ1MX18 579 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 MUM1Q2TAK8 710 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 UNC5BQ8IZJ1 945 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 RBM15BQ8NDT2 890 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 ZNF333Q96JL9 665 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 MARCOQ9UEW3 520 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 NR2E3Q9Y5X4 410 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 SF3B1O75533 1304 aaKnown RBP eCLIP16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 SPECC1L-ADORA2AF8WAN1 911 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 RNF103O00237 685 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 SPTLC1O15269 473 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 XPOTO43592 962 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 TBX10O75333 385 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 CDC25CP30307 473 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 AXLP30530 894 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 AP1B1Q10567 949 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 PDE1CQ14123 709 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 DNAL1Q4LDG9 190 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 MBLAC2Q68D91 279 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 MICAL1Q8TDZ2 1067 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 FAM167BQ9BTA0 163 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 FAM49AQ9H0Q0 323 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 NXF3Q9H4D5 531 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 CDHR5Q9HBB8 845 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 GJD2Q9UKL4 321 aa16.49■□□□□ 0.23
CHMP1A-202ENST00000535997 A6NHS1 94 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 ZNF189O75820 626 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 KRT36O76013 467 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 TM7SF2O76062 418 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 DARSP14868 501 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 AKAP5P24588 427 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 NOS2P35228 1153 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 SULT1E1P49888 294 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 SESN2P58004 480 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 CRADDP78560 199 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 DCAF6Q58WW2 860 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 N4BP2L1Q5TBK1 243 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 ANO7Q6IWH7 933 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 ZCCHC23Q6ZST2 131 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 PIGZQ86VD9 579 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 RNF139Q8WU17 664 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 FAM149B1Q96BN6 582 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 HNRNPABQ99729 332 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 DUSP16Q9BY84 665 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 XPNPEP3Q9NQH7 507 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 NMRK1Q9NWW6 199 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 ZNF212Q9UDV6 495 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 EMCNQ9ULC0 261 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 TPP1O14773 563 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 PPP1R12AO14974 1030 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 MFSD11O43934 449 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 PLIN3O60664 434 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 TOP3BO95985 862 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 POLBP06746 335 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 ITGA2BP08514 1039 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 KCNE1P15382 129 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 AOC1P19801 751 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 GRK2P25098 689 aa16.48■□□□□ 0.23
CHMP1A-202ENST00000535997 MGAT1P26572 445 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms