RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 POLR2EP19388 210 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 HOXD9P28356 352 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ACSL1P33121 698 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ST8SIA6P61647 398 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 PDE4CQ08493 712 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ADIGQ0VDE8 80 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 BST2Q10589 180 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CAMK2GQ13555 558 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 KIF19Q2TAC6 998 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 DCAF17Q5H9S7 520 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 RAB41Q5JT25 222 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ZNF776Q68DI1 518 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TMPRSS7Q7RTY8 843 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 FAM217AQ8IXS0 508 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 GUF1Q8N442 669 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ZNF366Q8N895 744 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 HNRNPLLQ8WVV9 542 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SKA1Q96BD8 255 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 P2RY11Q96G91 374 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SPATA32Q96LK8 384 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SGK2Q9HBY8 427 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TM9SF3Q9HD45 589 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ABCC13Q9NSE7 274 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 RAB20Q9NX57 234 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SUN2Q9UH99 717 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 RCOR1Q9UKL0 485 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 TSPAN16Q9UKR8 245 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CLEC4EQ9ULY5 219 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ANKRD6Q9Y2G4 727 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 SNX11Q9Y5W9 270 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 DMXL2Q8TDJ6 3036 aa13.53□□□□□ -0.24
TNFRSF1A-207ENST00000535958 DSPP15924 2871 aaKnown RBP13.52□□□□□ -0.24
TNFRSF1A-207ENST00000535958 CETN3O15182 167 aa13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TNFSF14O43557 240 aa13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ATXN1LP0C7T5 689 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PABPC1P11940 636 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CMA1P23946 247 aa13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 HLA-FP30511 346 aa13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 RAD23BP54727 409 aa13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 KRT85P78386 507 aa13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TRIP4Q15650 581 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TMEM215Q68D42 235 aa13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 MBLAC2Q68D91 279 aa13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 BAHD1Q8TBE0 780 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 EDEM1Q92611 657 aa13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 IGSF8Q969P0 613 aa13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SNX21Q969T3 373 aa13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 FTSJ1Q9UET6 329 aa13.52□□□□□ -0.25
TNFRSF1A-207ENST00000535958 FREM2Q5SZK8 3169 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 FAM47DPA6NHR8 397 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 DFNA5O60443 496 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CAPNS1P04632 268 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 DLDP09622 509 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SETSIPP0DME0 302 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CD27P26842 260 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SLC11A2P49281 568 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 BNC1Q01954 994 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 EDRF1Q3B7T1 1238 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ADGRF1Q5T601 910 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PM20D1Q6GTS8 502 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 MFN1Q8IWA4 741 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TATDN2Q93075 761 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 BIRC7Q96CA5 298 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 LRIG1Q96JA1 1093 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TSG101Q99816 390 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 DDX50Q9BQ39 737 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ACE2Q9BYF1 805 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TMEM245Q9H330 911 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 OSGEPQ9NPF4 335 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SFMBT1Q9UHJ3 866 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SCML1Q9UN30 329 aa13.51□□□□□ -0.25
TNFRSF1A-207ENST00000535958 MSI1O43347 362 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 TBL1XO60907 577 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 LCP1P13796 627 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 HNF1BP35680 557 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 RPS14P62263 151 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 IL9RQ01113 521 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CUL2Q13617 745 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 BSPRYQ5W0U4 402 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 NUGGCQ68CJ6 796 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 LAYNQ6UX15 382 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 UNC45BQ8IWX7 931 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PDCD7Q8N8D1 485 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 RBBP8NLQ8NC74 664 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 C1orf216Q8TAB5 229 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 NDRG1Q92597 394 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SEMA4DQ92854 862 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 SCUBE2Q9NQ36 999 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CNGB3Q9NQW8 809 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 DKK4Q9UBT3 224 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 HPSEQ9Y251 543 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 BTBD3Q9Y2F9 522 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 CEP83Q9Y592 693 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 LAMA5O15230 3695 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PTPRBP23467 1997 aa13.5□□□□□ -0.25
TNFRSF1A-207ENST00000535958 PLXNB3Q9ULL4 1909 aa13.49□□□□□ -0.25
TNFRSF1A-207ENST00000535958 ACACAQ13085 2346 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms