RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 POMGNT2Q8NAT1 580 aa18.58■□□□□ 0.57
SFSWAP-203ENST00000535236 TRPC4APQ8TEL6 797 aa18.58■□□□□ 0.57
SFSWAP-203ENST00000535236 PHF21BQ96EK2 531 aa18.58■□□□□ 0.57
SFSWAP-203ENST00000535236 PIF1Q9H611 641 aa18.58■□□□□ 0.57
SFSWAP-203ENST00000535236 INTS13Q9NVM9 706 aa18.58■□□□□ 0.57
SFSWAP-203ENST00000535236 C1DQ13901 141 aaKnown RBP18.58■□□□□ 0.57
SFSWAP-203ENST00000535236 RIOX1Q9H6W3 641 aa18.58■□□□□ 0.57
SFSWAP-203ENST00000535236 PCDH9Q9HC56 1237 aa18.58■□□□□ 0.57
SFSWAP-203ENST00000535236 ZNF839A8K0R7 811 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 PIK3CDO00329 1044 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 VIL1P09327 827 aaKnown RBP18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 KCNMB4Q86W47 210 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 USP7Q93009 1102 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 TRHDEQ9UKU6 1024 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 NBNO60934 754 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 JAK1P23458 1154 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 CRYMQ14894 314 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 SLC30A10Q6XR72 485 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 MCOLN2Q8IZK6 566 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 SPACA7Q96KW9 195 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 SH3GL3Q99963 347 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 NMRAL1Q9HBL8 299 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 TAS2R13Q9NYV9 303 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 ADAM30Q9UKF2 790 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 TRIM17Q9Y577 477 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 CAPN6Q9Y6Q1 641 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 TRIM66O15016 1216 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 NUDT14O95848 222 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 NPY2RP49146 381 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 OAZ1P54368 228 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 RAD23AP54725 363 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 CCDC92Q53HC0 331 aaPredicted RBP18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 TYW3Q6IPR3 259 aaKnown RBP18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 AKT1S1Q96B36 256 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 BBS4Q96RK4 519 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 DCLK3Q9C098 648 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 MFSD1Q9H3U5 465 aa18.58■□□□□ 0.56
SFSWAP-203ENST00000535236 NFASCO94856 1347 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 KPNA3O00505 521 aaPredicted RBP18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 PABPC1P11940 636 aaKnown RBP18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 PRLRP16471 622 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 POLR2EP19388 210 aaKnown RBP18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 FSCN1Q16658 493 aaKnown RBP18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 CACUL1Q86Y37 369 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 HTR3CQ8WXA8 447 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 STK39Q9UEW8 545 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 DUSP10Q9Y6W6 482 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 PGAM1P18669 254 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 CALB2P22676 271 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 MLH1P40692 756 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 KCNMA1Q12791 1236 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 SPPL2AQ8TCT8 520 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 TBL1YQ9BQ87 522 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 ROGDIQ9GZN7 287 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 EPS8L2Q9H6S3 715 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 IL1R1P14778 569 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 C4BPBP20851 252 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 GRIK3Q13003 919 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 C3orf67Q6ZVT6 689 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 PANX3Q96QZ0 392 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 POLR1DQ9Y2S0 133 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 MAGEA13PA6NCF6 341 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 MT-CO1P00395 513 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 FAM45BPQ6NSW5 357 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 SLC30A9Q6PML9 568 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 ZNF606Q8WXB4 792 aa18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 UBA2Q9UBT2 640 aaPredicted RBP18.57■□□□□ 0.56
SFSWAP-203ENST00000535236 REREQ9P2R6 1566 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 WDR27A2RRH5 827 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 LACTBL1A8MY62 500 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 HSMCR30P0CW71 290 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 CRABP2P29373 138 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 SKP1P63208 163 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 ACVR2BQ13705 512 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 RASA2Q15283 850 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 C16orf59Q7L2K0 433 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 CLYBLQ8N0X4 340 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 FIG4Q92562 907 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 TMBIM4Q9HC24 238 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 ENO2P09104 434 aaPredicted RBP18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 TYMPP19971 482 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 POLR2LP62875 67 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 CCDC153Q494R4 210 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 SPANXN3Q5MJ09 141 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 COMMD2Q86X83 199 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 SLC2A14Q8TDB8 520 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 HNRNPLLQ8WVV9 542 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 P2RX7Q99572 595 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 SEC22BO75396 215 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 TALDO1P37837 337 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 RAB14P61106 215 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 XRCC4Q13426 336 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 SETMARQ53H47 684 aaPredicted RBP18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 MACC1Q6ZN28 852 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 UTP15Q8TED0 518 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 TRAPPC12Q8WVT3 735 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 SUSD6Q92537 303 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 NACC2Q96BF6 587 aa18.56■□□□□ 0.56
SFSWAP-203ENST00000535236 RPRD1BQ9NQG5 326 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms