RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 MRPL17Q9NRX2 175 aaKnown RBP24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 SSX2IPQ9Y2D8 614 aa24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 INSL6Q9Y581 213 aa24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 MSI1O43347 362 aaKnown RBP24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 MFSD11O43934 449 aa24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 SYF2O95926 243 aaKnown RBP24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 ERCC2P18074 760 aa24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 RAB33AQ14088 237 aa24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 PDK1Q15118 436 aa24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 PDZD8Q8NEN9 1154 aa24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 TFB1MQ8WVM0 346 aaKnown RBP24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 OVCA2Q8WZ82 227 aa24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 CDK5RAP1Q96SZ6 601 aaKnown RBP24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 SH3GL2Q99962 352 aa24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 UBE2OQ9C0C9 1292 aaKnown RBP24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 MAFFQ9ULX9 164 aa24.57■■□□□ 1.52
PTPMT1-205ENST00000534775 PPP1R12AO14974 1030 aaPredicted RBP24.56■■□□□ 1.52
PTPMT1-205ENST00000534775 ZDHHC11BP0C7U3 371 aa24.56■■□□□ 1.52
PTPMT1-205ENST00000534775 CHKAP35790 457 aa24.56■■□□□ 1.52
PTPMT1-205ENST00000534775 EIF3BP55884 814 aaKnown RBP24.56■■□□□ 1.52
PTPMT1-205ENST00000534775 DENND2CQ68D51 928 aa24.56■■□□□ 1.52
PTPMT1-205ENST00000534775 HEATR6Q6AI08 1181 aaKnown RBP24.56■■□□□ 1.52
PTPMT1-205ENST00000534775 FNIP2Q9P278 1114 aa24.56■■□□□ 1.52
PTPMT1-205ENST00000534775 NUDT5Q9UKK9 219 aa24.56■■□□□ 1.52
PTPMT1-205ENST00000534775 GOLGA8KD6RF30 607 aa24.55■■□□□ 1.52
PTPMT1-205ENST00000534775 NCAM2O15394 837 aa24.55■■□□□ 1.52
PTPMT1-205ENST00000534775 LRIG2O94898 1065 aa24.55■■□□□ 1.52
PTPMT1-205ENST00000534775 MAP3K6O95382 1288 aa24.55■■□□□ 1.52
PTPMT1-205ENST00000534775 SERPINB6P35237 376 aa24.55■■□□□ 1.52
PTPMT1-205ENST00000534775 TBX4P57082 545 aa24.55■■□□□ 1.52
PTPMT1-205ENST00000534775 TMEM240Q5SV17 173 aa24.55■■□□□ 1.52
PTPMT1-205ENST00000534775 RELL1Q8IUW5 271 aa24.55■■□□□ 1.52
PTPMT1-205ENST00000534775 CYP4F11Q9HBI6 524 aa24.55■■□□□ 1.52
PTPMT1-205ENST00000534775 MAGED2Q9UNF1 606 aaPredicted RBP24.55■■□□□ 1.52
PTPMT1-205ENST00000534775 MFHAS1Q9Y4C4 1052 aa24.55■■□□□ 1.52
PTPMT1-205ENST00000534775 FARP1Q9Y4F1 1045 aaPredicted RBP24.55■■□□□ 1.52
PTPMT1-205ENST00000534775 KCNU1A8MYU2 1149 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 PAGE1O75459 146 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 FGF18O76093 207 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 APOEP02649 317 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 NUDT17P0C025 328 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 CSH1P0DML2 217 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 CSH2P0DML3 217 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 EPHB2P29323 1055 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 ALDH1A3P47895 512 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 CBX1P83916 185 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 NRG1Q02297 640 aaPredicted RBP24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 EFEMP1Q12805 493 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 RASIP1Q5U651 963 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 B4GALNT4Q76KP1 1039 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 TADA2BQ86TJ2 420 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 C7orf61Q8IZ16 206 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 SLC39A13Q96H72 371 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 SLC12A6Q9UHW9 1150 aa24.54■■□□□ 1.52
PTPMT1-205ENST00000534775 GOLGA6L10A6NI86 522 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 H0YGN5 161 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 STK10O94804 968 aaKnown RBP24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 SEC24AO95486 1093 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 ELF1P32519 619 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 KPNA1P52294 538 aaPredicted RBP24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 MTA1Q13330 715 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 TRIP4Q15650 581 aaPredicted RBP24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 C10orf120Q5SQS8 335 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 ZNF276Q8N554 614 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 CPT1BQ92523 772 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 PRCCQ92733 491 aaPredicted RBP24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 CLP1Q92989 425 aaKnown RBP24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 PHACTR1Q9C0D0 580 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 BRD8Q9H0E9 1235 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 SIK2Q9H0K1 926 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 SEMA4AQ9H3S1 761 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 MARCH2Q9P0N8 246 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 YIPF1Q9Y548 306 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 NFS1Q9Y697 457 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 C5orf60A6NFR6 353 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 FGF10O15520 208 aaPredicted RBP24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 GCATO75600 419 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 MX2P20592 715 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 BASP1P80723 227 aaKnown RBP24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 VEPH1Q14D04 833 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 PRKD1Q15139 912 aaPredicted RBP24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 ACBD5Q5T8D3 534 aaPredicted RBP24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 ATP6V0D2Q8N8Y2 350 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 NAT8LQ8N9F0 302 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 HTR3CQ8WXA8 447 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 ZBTB9Q96C00 473 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 TBC1D31Q96DN5 1066 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 FCRL2Q96LA5 508 aaPredicted RBP24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 C1orf74Q96LT6 269 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 RBM15Q96T37 977 aaKnown RBP eCLIP24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 KLC2Q9H0B6 622 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 CDC42EP4Q9H3Q1 356 aaKnown RBP24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 CATSPERBQ9H7T0 1116 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 PCDH10Q9P2E7 1040 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 SNX10Q9Y5X0 201 aa24.53■■□□□ 1.52
PTPMT1-205ENST00000534775 RIPK2O43353 540 aa24.52■■□□□ 1.52
PTPMT1-205ENST00000534775 DNAJB2P25686 324 aa24.52■■□□□ 1.52
PTPMT1-205ENST00000534775 HOXC13P31276 330 aa24.52■■□□□ 1.52
PTPMT1-205ENST00000534775 IFFO1Q0D2I5 559 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms