RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 WASP42768 502 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 DGKEP52429 567 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 COG7P83436 770 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 KCNJ12Q14500 433 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 DMC1Q14565 340 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 MAN2A1Q16706 1144 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 GAB4Q2WGN9 574 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 VWA3BQ502W6 1294 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 ARSJQ5FYB0 599 aaPredicted RBP9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 RAB41Q5JT25 222 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 C10orf76Q5T2E6 689 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 BSPRYQ5W0U4 402 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 GRAMD4Q6IC98 578 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 DENND1BQ6P3S1 775 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 SASS6Q6UVJ0 657 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 LONP2Q86WA8 852 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 FMNL3Q8IVF7 1028 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 ALLCQ8N6M5 410 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 SUMF1Q8NBK3 374 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 CLEC4CQ8WTT0 213 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 RUBCNQ92622 972 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 GOLGA1Q92805 767 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 ACDQ96AP0 544 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 OTUB2Q96DC9 234 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 TUBGCP2Q9BSJ2 902 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 NDST4Q9H3R1 872 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 TAB2Q9NYJ8 693 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 CLIC5Q9NZA1 410 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 DMGDHQ9UI17 866 aaKnown RBP9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 ATG2BQ96BY7 2078 aa9.34□□□□□ -0.91
CCDC90B-219ENST00000534753 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 AXIN1O15169 862 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 MED7O43513 233 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 LILRB5O75023 590 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 KLKB1P03952 638 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 PNMA6AP0CW24 399 aaPredicted RBP9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 ERCC5P28715 1186 aaPredicted RBP9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 GRIA2P42262 883 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 MAPK8P45983 427 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 IDH3AP50213 366 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 ZNF132P52740 706 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 DAOAP59103 153 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 RAPGEF1Q13905 1077 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 LAPTM4AQ15012 233 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 STILQ15468 1287 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 PM20D1Q6GTS8 502 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 ANO7Q6IWH7 933 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 KLHDC10Q6PID8 442 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 CLEC17AQ6ZS10 378 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 ENOSF1Q7L5Y1 443 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 PASD1Q8IV76 773 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 PGBD3Q8N328 593 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 TXNDC5Q8NBS9 432 aaKnown RBP9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 TSTD1Q8NFU3 115 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 CCDC26Q8TAB7 109 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 USP33Q8TEY7 942 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 SLC35F5Q8WV83 523 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 KCTD13Q8WZ19 329 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 FAM149B1Q96BN6 582 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 XPO6Q96QU8 1125 aaKnown RBP9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 TPSD1Q9BZJ3 242 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 DCLK3Q9C098 648 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 VPS16Q9H269 839 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 PDCL3Q9H2J4 239 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 RUBCNLQ9H714 662 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 ABCC13Q9NSE7 274 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 BCCIPQ9P287 314 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 WDR35Q9P2L0 1181 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 APEX2Q9UBZ4 518 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 DNAJC12Q9UKB3 198 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 AJAP1Q9UKB5 411 aaPredicted RBP9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 GMEB2Q9UKD1 530 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 USP18Q9UMW8 372 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 NFE2L3Q9Y4A8 694 aa9.33□□□□□ -0.92
CCDC90B-219ENST00000534753 MYOFQ9NZM1 2061 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 VPS13AQ96RL7 3174 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 DCLK1O15075 740 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 HOXC11O43248 304 aaPredicted RBP9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 GREM1O60565 184 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 RPP40O75818 363 aaKnown RBP9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 APBB3O95704 486 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 LTFP02788 710 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 CYBBP04839 570 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 TPM2P07951 284 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 NCAM1P13591 858 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 GBP1P32455 592 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 HARS2P49590 506 aaKnown RBP9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 DGKGP49619 791 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 SMCPP49901 116 aaPredicted RBP9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 SPEM2Q0P670 501 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 TCP11X2Q5H9J9 407 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 C11orf57Q6ZUT1 292 aaPredicted RBP9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 TOGARAM2Q6ZUX3 1019 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 SYT13Q7L8C5 426 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 BHLHA9Q7RTU4 235 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 WDR5BQ86VZ2 330 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 ZNF513Q8N8E2 541 aaPredicted RBP9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 KIAA1958Q8N8K9 716 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 DDI1Q8WTU0 396 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms