RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 GOLGA1Q92805 767 aa8.17□□□□□ -1.1
NXF1-215ENST00000533440 MS4A3Q96HJ5 214 aa8.17□□□□□ -1.1
NXF1-215ENST00000533440 ZNF578Q96N58 590 aaPredicted RBP8.17□□□□□ -1.1
NXF1-215ENST00000533440 CDK5RAP1Q96SZ6 601 aaKnown RBP8.17□□□□□ -1.1
NXF1-215ENST00000533440 HNRNPABQ99729 332 aaKnown RBP8.17□□□□□ -1.1
NXF1-215ENST00000533440 CPNE5Q9HCH3 593 aa8.17□□□□□ -1.1
NXF1-215ENST00000533440 AGPAT3Q9NRZ7 376 aa8.17□□□□□ -1.1
NXF1-215ENST00000533440 NAGPAQ9UK23 515 aa8.17□□□□□ -1.1
NXF1-215ENST00000533440 SRPRBQ9Y5M8 271 aaKnown RBP8.17□□□□□ -1.1
NXF1-215ENST00000533440 USP3Q9Y6I4 520 aa8.17□□□□□ -1.1
NXF1-215ENST00000533440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.16□□□□□ -1.1
NXF1-215ENST00000533440 WNT9AO14904 365 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 EIF3DO15371 548 aaKnown RBP eCLIP8.16□□□□□ -1.1
NXF1-215ENST00000533440 DXOO77932 396 aaKnown RBP8.16□□□□□ -1.1
NXF1-215ENST00000533440 RALAP11233 206 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 ACP1P24666 158 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 HOXD9P28356 352 aaPredicted RBP8.16□□□□□ -1.1
NXF1-215ENST00000533440 CD38P28907 300 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 GJB2P29033 226 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 ARRB1P49407 418 aaPredicted RBP8.16□□□□□ -1.1
NXF1-215ENST00000533440 NDST1P52848 882 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 GALCP54803 685 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 PCBP4P57723 403 aaKnown RBP8.16□□□□□ -1.1
NXF1-215ENST00000533440 SNRPFP62306 86 aaKnown RBP8.16□□□□□ -1.1
NXF1-215ENST00000533440 BNIP3Q12983 259 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 FNDC3BQ53EP0 1204 aaKnown RBP8.16□□□□□ -1.1
NXF1-215ENST00000533440 ARHGAP40Q5TG30 622 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 BROXQ5VW32 411 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 ZNF776Q68DI1 518 aaPredicted RBP8.16□□□□□ -1.1
NXF1-215ENST00000533440 SCARA5Q6ZMJ2 495 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 CCDC73Q6ZRK6 1079 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 BRAPQ7Z569 592 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 ADIPOR2Q86V24 386 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 UNC93AQ86WB7 457 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 DENND1CQ8IV53 801 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 DHX40Q8IX18 779 aaKnown RBP8.16□□□□□ -1.1
NXF1-215ENST00000533440 XXYLT1Q8NBI6 393 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 PLEKHO2Q8TD55 490 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 WFIKKN2Q8TEU8 576 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 DDI1Q8WTU0 396 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 CYB5D2Q8WUJ1 264 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 HPS3Q969F9 1004 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 ELMO3Q96BJ8 720 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 MED8Q96G25 268 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 RSPH9Q9H1X1 276 aaPredicted RBP8.16□□□□□ -1.1
NXF1-215ENST00000533440 PIEZO2Q9H5I5 2752 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 ERVMER34-1Q9H9K5 563 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 GDF3Q9NR23 364 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 FAM49BQ9NUQ9 324 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 HMGXB4Q9UGU5 601 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 ADAMTS1Q9UHI8 967 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 RASAL2Q9UJF2 1139 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 FBXO2Q9UK22 296 aaPredicted RBP8.16□□□□□ -1.1
NXF1-215ENST00000533440 SCML1Q9UN30 329 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 PLA2G4CQ9UP65 541 aa8.16□□□□□ -1.1
NXF1-215ENST00000533440 UBR5O95071 2799 aaPredicted RBP8.16□□□□□ -1.1
NXF1-215ENST00000533440 A0A087X0B3 334 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 CLIC2O15247 247 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 SLC28A2O43868 658 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 PHACTR2O75167 634 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 VNN1O95497 513 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 MT-CO3P00414 261 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 C4BPAP04003 597 aaKnown RBP8.15□□□□□ -1.1
NXF1-215ENST00000533440 HMBSP08397 361 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 DLDP09622 509 aaKnown RBP8.15□□□□□ -1.1
NXF1-215ENST00000533440 ADORA2BP29275 332 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 TXLNAP40222 546 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 STAT6P42226 847 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 CASP4P49662 377 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 CSRP3P50461 194 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 CYP2J2P51589 502 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 CCR5P51681 352 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 AP3M2P53677 418 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 NXPH1P58417 271 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 CLDN10P78369 228 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 E2F1Q01094 437 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 VAC14Q08AM6 782 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 EFEMP1Q12805 493 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 NCOA4Q13772 614 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 KCNJ12Q14500 433 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 PROX2Q3B8N5 592 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 MPPE1Q53F39 396 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 NCEH1Q6PIU2 408 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 CHST9Q7L1S5 443 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 C12orf56Q8IXR9 622 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 ZC3H3Q8IXZ2 948 aaKnown RBP8.15□□□□□ -1.1
NXF1-215ENST00000533440 LSMEM2Q8N112 164 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 OXR1Q8N573 874 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 OR2T34Q8NGX1 318 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 JAKMIP2Q96AA8 810 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 CYFIP2Q96F07 1278 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 MYO19Q96H55 970 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 NAF1Q96HR8 494 aaKnown RBP8.15□□□□□ -1.1
NXF1-215ENST00000533440 CLIC6Q96NY7 704 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 DPH1Q9BZG8 443 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 PABPC3Q9H361 631 aaKnown RBP8.15□□□□□ -1.1
NXF1-215ENST00000533440 AASDHPPTQ9NRN7 309 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 FBXL12Q9NXK8 326 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 SERGEFQ9UGK8 458 aa8.15□□□□□ -1.1
NXF1-215ENST00000533440 SUN2Q9UH99 717 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms