RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 FICDQ9BVA6 458 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 VPS33BQ9H267 617 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 ABHD16BQ9H3Z7 469 aa12.55□□□□□ -0.4
BDNF-218ENST00000533246 MEI4A8MW99 385 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 LIN7AO14910 233 aaPredicted RBP12.54□□□□□ -0.4
BDNF-218ENST00000533246 PHGDHO43175 533 aaKnown RBP12.54□□□□□ -0.4
BDNF-218ENST00000533246 NAT2P11245 290 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 ARF4P18085 180 aaPredicted RBP12.54□□□□□ -0.4
BDNF-218ENST00000533246 FDFT1P37268 417 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 NCKAP1LP55160 1127 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 SLC6A3Q01959 620 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 FASTKD3Q14CZ7 662 aaKnown RBP12.54□□□□□ -0.4
BDNF-218ENST00000533246 ARHGEF6Q15052 776 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 FAM83EQ2M2I3 478 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 ABHD15Q6UXT9 468 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 FAM183BPQ6ZVS7 135 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 SIAH1Q8IUQ4 282 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 CPXM1Q96SM3 734 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 DDX50Q9BQ39 737 aaKnown RBP12.54□□□□□ -0.4
BDNF-218ENST00000533246 SNRNP25Q9BV90 132 aaKnown RBP12.54□□□□□ -0.4
BDNF-218ENST00000533246 UBXN6Q9BZV1 441 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 MYLK2Q9H1R3 596 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 TBC1D23Q9NUY8 699 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 ITGA11Q9UKX5 1188 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 VANGL2Q9ULK5 521 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 ORC6Q9Y5N6 252 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 PGK1P00558 417 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 CCNFP41002 786 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 ACVR2BQ13705 512 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 TMEM53Q6P2H8 277 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 TLK2Q86UE8 772 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 PIGZQ86VD9 579 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 MREGQ8N565 214 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 CLEC4DQ8WXI8 215 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 SNX19Q92543 992 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 OMA1Q96E52 524 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 KCNK16Q96T55 309 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 APBA2Q99767 749 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 CASS4Q9NQ75 786 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 XPNPEP1Q9NQW7 623 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 GLRA3O75311 464 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 YBX3P16989 372 aaKnown RBP eCLIP12.54□□□□□ -0.4
BDNF-218ENST00000533246 MFSD14AQ96MC6 490 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 FRMD8Q9BZ67 464 aaPredicted RBP12.54□□□□□ -0.4
BDNF-218ENST00000533246 RNPEPQ9H4A4 650 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 PIF1Q9H611 641 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 SMPD4Q9NXE4 827 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 ATP11BQ9Y2G3 1177 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 TDRKHQ9Y2W6 561 aaKnown RBP12.54□□□□□ -0.4
BDNF-218ENST00000533246 NCANO14594 1321 aa12.54□□□□□ -0.4
BDNF-218ENST00000533246 SLIT3O75094 1523 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 FAM237BA0A1B0GVD1 139 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 SLC12A8A0AV02 714 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 DNM1LO00429 736 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 TBC1D12O60347 775 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 MAFO75444 373 aaPredicted RBP12.53□□□□□ -0.4
BDNF-218ENST00000533246 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.53□□□□□ -0.4
BDNF-218ENST00000533246 RIOX2Q8IUF8 465 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 CD302Q8IX05 232 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 GPC2Q8N158 579 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 USP13Q92995 863 aaPredicted RBP12.53□□□□□ -0.4
BDNF-218ENST00000533246 FBXO32Q969P5 355 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 GPR63Q9BZJ6 419 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 KLHL25Q9H0H3 589 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 CD274Q9NZQ7 290 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 MED1Q15648 1581 aaPredicted RBP12.53□□□□□ -0.4
BDNF-218ENST00000533246 ERI2A8K979 691 aaKnown RBP12.53□□□□□ -0.4
BDNF-218ENST00000533246 RHOBTB1O94844 696 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 LINGO3P0C6S8 592 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 HMOX2P30519 316 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 NRLP54845 237 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 FLOT2Q14254 428 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 OVOS1Q6IE37 1185 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 TRAPPC9Q96Q05 1148 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 SIX2Q9NPC8 291 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 CDYLQ9Y232 598 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 ACOT9Q9Y305 439 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 BCL9LQ86UU0 1499 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 DCXO43602 365 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 ODC1P11926 461 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 DRD4P21917 467 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 FUT4P22083 530 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 MMP8P22894 467 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 INHBEP58166 350 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 SPIRE1Q08AE8 756 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 MGAT5Q09328 741 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 LPPQ93052 612 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 ART4Q93070 314 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 C18orf25Q96B23 403 aaPredicted RBP12.53□□□□□ -0.4
BDNF-218ENST00000533246 TUBGCP3Q96CW5 907 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 SENP8Q96LD8 212 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 TRIM62Q9BVG3 475 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 PRDM12Q9H4Q4 367 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 ACSS2Q9NR19 701 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 PRKAG2Q9UGJ0 569 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 MYH10P35580 1976 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 A0A096LPK6 155 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 MTSS1O43312 755 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
BDNF-218ENST00000533246 SERPINB8P50452 374 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms