RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 XYLT1Q86Y38 959 aa15.23■□□□□ 0.03
CAPN1-224ENST00000533129 TMEM126BQ8IUX1 230 aa15.23■□□□□ 0.03
CAPN1-224ENST00000533129 AHI1Q8N157 1196 aa15.23■□□□□ 0.03
CAPN1-224ENST00000533129 HIPK4Q8NE63 616 aa15.23■□□□□ 0.03
CAPN1-224ENST00000533129 DEPTORQ8TB45 409 aa15.23■□□□□ 0.03
CAPN1-224ENST00000533129 PPP4R1Q8TF05 950 aa15.23■□□□□ 0.03
CAPN1-224ENST00000533129 SUDS3Q9H7L9 328 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-224ENST00000533129 GBA2Q9HCG7 927 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-224ENST00000533129 CYTH4Q9UIA0 394 aa15.23■□□□□ 0.03
CAPN1-224ENST00000533129 ARHGAP26Q9UNA1 814 aa15.23■□□□□ 0.03
CAPN1-224ENST00000533129 KCNN4O15554 427 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 DNAJA2O60884 412 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 GLRA3O75311 464 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 ITGBL1O95965 494 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-224ENST00000533129 GRK2P25098 689 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 MMRN1Q13201 1228 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 Q3C1V9 767 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 NADK2Q4G0N4 442 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 TRMT10BQ6PF06 316 aaKnown RBP15.22■□□□□ 0.03
CAPN1-224ENST00000533129 PIAS4Q8N2W9 510 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-224ENST00000533129 TFB1MQ8WVM0 346 aaKnown RBP15.22■□□□□ 0.03
CAPN1-224ENST00000533129 CATSPER2Q96P56 530 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 MMP19Q99542 508 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 ZNF696Q9H7X3 374 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 EMCNQ9ULC0 261 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 LZTS1Q9Y250 596 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-224ENST00000533129 ZSCAN9O15535 394 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-224ENST00000533129 MED7O43513 233 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 TNFAIP8O95379 198 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 TOP3BO95985 862 aaKnown RBP15.22■□□□□ 0.03
CAPN1-224ENST00000533129 APRTP07741 180 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 SUPT20HL2P0C7V6 817 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 CDH6P55285 790 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 RPL10AP62906 217 aaKnown RBP15.22■□□□□ 0.03
CAPN1-224ENST00000533129 FSTL1Q12841 308 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 FRMD7Q6ZUT3 714 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 METTL25Q8N6Q8 603 aa15.22■□□□□ 0.03
CAPN1-224ENST00000533129 EBNA1BP2Q99848 306 aaKnown RBP15.22■□□□□ 0.03
CAPN1-224ENST00000533129 LRRC37A2A6NM11 1700 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 USP41Q3LFD5 358 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 MTERF2Q49AM1 385 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 CCDC60Q8IWA6 550 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-224ENST00000533129 CATSPER1Q8NEC5 780 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 DEPDC1BQ8WUY9 529 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 MAML3Q96JK9 1138 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 SIGLEC10Q96LC7 697 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 PEBP4Q96S96 227 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 CPXM1Q96SM3 734 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 MTMR12Q9C0I1 747 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 RRAGCQ9HB90 399 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.21■□□□□ 0.03
CAPN1-224ENST00000533129 ASNSD1Q9NWL6 643 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 UBAP1Q9NZ09 502 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 DOCK5Q9H7D0 1870 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 DNAJC25-GNG10A0A024R161 153 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 ARHGAP10A1A4S6 786 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 LRRIQ4A6NIV6 560 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 ZNF195O14628 629 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 PLIN3O60664 434 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 PFDN1O60925 122 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 STK10O94804 968 aaKnown RBP15.21■□□□□ 0.03
CAPN1-224ENST00000533129 TGFB3P10600 412 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 SP2Q02086 613 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 CNGA3Q16281 694 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 XKR3Q5GH77 459 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 N4BP2L1Q5TBK1 243 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-224ENST00000533129 FAXCQ5TGI0 409 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 BORAQ6PGQ7 559 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 C4orf22Q6V702 233 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 CYS1Q717R9 158 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 C2orf69Q8N8R5 385 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-224ENST00000533129 MS4A4AQ96JQ5 239 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 DNAJC1Q96KC8 554 aaKnown RBP15.21■□□□□ 0.03
CAPN1-224ENST00000533129 SORT1Q99523 831 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 RTKNQ9BST9 563 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 PORCNQ9H237 461 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 G3BP2Q9UN86 482 aaKnown RBP15.21■□□□□ 0.03
CAPN1-224ENST00000533129 PCDHA11Q9Y5I1 949 aa15.21■□□□□ 0.03
CAPN1-224ENST00000533129 BCLAF3A2AJT9 711 aaKnown RBP15.2■□□□□ 0.02
CAPN1-224ENST00000533129 ZBED1O96006 694 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 ERBB2P04626 1255 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 CYLC2Q14093 348 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-224ENST00000533129 PCLAFQ15004 111 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 FSCBQ5H9T9 825 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 RARS2Q5T160 578 aaKnown RBP15.2■□□□□ 0.02
CAPN1-224ENST00000533129 TMEM143Q96AN5 459 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 RNF157Q96PX1 679 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 CCL15-CCL14A0A0B4J2E2 113 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 ADCY3O60266 1144 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 EDN1P05305 212 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 COX4I1P13073 169 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 TGM2P21980 687 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 UBA1P22314 1058 aaKnown RBP15.2■□□□□ 0.02
CAPN1-224ENST00000533129 ASPAP45381 313 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 CCNA1P78396 465 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 SP4Q02446 784 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 CREB5Q02930 508 aa15.2■□□□□ 0.02
CAPN1-224ENST00000533129 CCL15Q16663 113 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms