RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 RNF187Q5TA31 235 aaPredicted RBP15.68■□□□□ 0.1
SRPRA-206ENST00000532259 ANKRD20A1Q5TYW2 823 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 ANKRD20A3Q5VUR7 823 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 PM20D1Q6GTS8 502 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 CTAGE3PQ8IX95 158 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 CELF6Q96J87 481 aaKnown RBP15.68■□□□□ 0.1
SRPRA-206ENST00000532259 SEC16BQ96JE7 1060 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 GPR62Q9BZJ7 368 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 PLAC1Q9HBJ0 212 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 PSMC3IPQ9P2W1 217 aaPredicted RBP15.68■□□□□ 0.1
SRPRA-206ENST00000532259 DSEQ9UL01 958 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 MAGED2Q9UNF1 606 aaPredicted RBP15.68■□□□□ 0.1
SRPRA-206ENST00000532259 PHF24Q9UPV7 400 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 PTPRDP23468 1912 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 INPPL1O15357 1258 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 STX2P32856 288 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 MAP2K2P36507 400 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 CDK7P50613 346 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 ZNF534Q76KX8 674 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 TMEM173Q86WV6 379 aaPredicted RBP15.68■□□□□ 0.1
SRPRA-206ENST00000532259 PDCD7Q8N8D1 485 aaKnown RBP15.68■□□□□ 0.1
SRPRA-206ENST00000532259 COLGALT1Q8NBJ5 622 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 DQX1Q8TE96 717 aaKnown RBP15.68■□□□□ 0.1
SRPRA-206ENST00000532259 CENPTQ96BT3 561 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 AGAP3Q96P47 875 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 ELAC2Q9BQ52 826 aaKnown RBP15.68■□□□□ 0.1
SRPRA-206ENST00000532259 ZC3H7BQ9UGR2 993 aaKnown RBP15.68■□□□□ 0.1
SRPRA-206ENST00000532259 PCDHB8Q9UN66 801 aa15.68■□□□□ 0.1
SRPRA-206ENST00000532259 SCN5AQ14524 2016 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 VWA8A3KMH1 1905 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 DCLK1O15075 740 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 TADA2AO75478 443 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 KRT4P19013 534 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 EPHB2P29323 1055 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 RPA3P35244 121 aaPredicted RBP15.67■□□□□ 0.1
SRPRA-206ENST00000532259 MSH2P43246 934 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 CCL23P55773 120 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 SEMA3BQ13214 749 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 RWDD4Q6NW29 188 aaKnown RBP15.67■□□□□ 0.1
SRPRA-206ENST00000532259 ATAD1Q8NBU5 361 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 ACSS3Q9H6R3 686 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 NMUR1Q9HB89 426 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 FGFR1OP2Q9NVK5 253 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 OSER1Q9NX31 292 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 NKIRAS1Q9NYS0 192 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 OR12D3Q9UGF7 316 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 SHROOM3Q8TF72 1996 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 TNFRSF10BO14763 440 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 GCATO75600 419 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 MOCS2O96007 188 aaPredicted RBP15.67■□□□□ 0.1
SRPRA-206ENST00000532259 PSMB4P28070 264 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 XRCC4Q13426 336 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 CASC4Q6P4E1 433 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 SCD5Q86SK9 330 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 C10orf67Q8IYJ2 551 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 ABI1Q8IZP0 508 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 URGCPQ8TCY9 931 aa15.67■□□□□ 0.1
SRPRA-206ENST00000532259 CXorf49A8MYA2 514 aaPredicted RBP15.66■□□□□ 0.1
SRPRA-206ENST00000532259 ATP2A2P16615 1042 aaKnown RBP15.66■□□□□ 0.1
SRPRA-206ENST00000532259 TYMPP19971 482 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 CA4P22748 312 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 NUMBP49757 651 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 SESN2P58004 480 aaPredicted RBP15.66■□□□□ 0.1
SRPRA-206ENST00000532259 USP46P62068 366 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 VARS2Q5ST30 1063 aaKnown RBP15.66■□□□□ 0.1
SRPRA-206ENST00000532259 GKAP1Q5VSY0 366 aaPredicted RBP15.66■□□□□ 0.1
SRPRA-206ENST00000532259 FAM171A1Q5VUB5 890 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 NUGGCQ68CJ6 796 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 UNC5BQ8IZJ1 945 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 PPM1NQ8N819 430 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 SPOCK2Q92563 424 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 THOC1Q96FV9 657 aaKnown RBP15.66■□□□□ 0.1
SRPRA-206ENST00000532259 SMC6Q96SB8 1091 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 GGT7Q9UJ14 662 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 MYO1CO00159 1063 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 UGT1A9O60656 530 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 USP12O75317 370 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 LRIG2O94898 1065 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 CPP00450 1065 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 CXCR3P49682 368 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 WDR4P57081 412 aaKnown RBP15.66■□□□□ 0.1
SRPRA-206ENST00000532259 ARL13BQ3SXY8 428 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 RSPO2Q6UXX9 243 aaPredicted RBP15.66■□□□□ 0.1
SRPRA-206ENST00000532259 CASP10Q92851 521 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 CABS1Q96KC9 395 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 UGT1A7Q9HAW7 530 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 UGT1A10Q9HAW8 530 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 UGT1A8Q9HAW9 530 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 TMEM161AQ9NX61 479 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 BPTFQ12830 3046 aa15.66■□□□□ 0.1
SRPRA-206ENST00000532259 A0A0A0MRY4 1105 aa15.65■□□□□ 0.1
SRPRA-206ENST00000532259 C5orf60A6NFR6 353 aa15.65■□□□□ 0.1
SRPRA-206ENST00000532259 FAM47DPA6NHR8 397 aa15.65■□□□□ 0.1
SRPRA-206ENST00000532259 HGSO14964 777 aaPredicted RBP15.65■□□□□ 0.1
SRPRA-206ENST00000532259 WASHC5Q12768 1159 aa15.65■□□□□ 0.1
SRPRA-206ENST00000532259 PLEKHG4Q58EX7 1191 aa15.65■□□□□ 0.1
SRPRA-206ENST00000532259 BTBD8Q5XKL5 378 aa15.65■□□□□ 0.1
SRPRA-206ENST00000532259 TRMT10BQ6PF06 316 aaKnown RBP15.65■□□□□ 0.1
SRPRA-206ENST00000532259 PPP1R21Q6ZMI0 780 aa15.65■□□□□ 0.1
SRPRA-206ENST00000532259 FAM47EQ6ZV65 393 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms