RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 C1orf216Q8TAB5 229 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 RNF139Q8WU17 664 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 IPO9Q96P70 1041 aaKnown RBP19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 C6orf106Q9H6K1 298 aaPredicted RBP19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 GDPD2Q9HCC8 539 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 OLA1Q9NTK5 396 aaKnown RBP19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 ABCB8Q9NUT2 735 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 PCOLCE2Q9UKZ9 415 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 APC2O95996 2303 aa19.23■□□□□ 0.67
SSSCA1-206ENST00000531405 TIMM44O43615 452 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 ACSL1P33121 698 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 MATKP42679 507 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 PRCPP42785 496 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 SCAPQ12770 1279 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 LRMPQ12912 555 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 CAMK2GQ13555 558 aaPredicted RBP19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 HLA-BQ31612 363 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 CHST9Q7L1S5 443 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 ADIPOR2Q86V24 386 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 ZC3H3Q8IXZ2 948 aaKnown RBP19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 LHX5Q9H2C1 402 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 TMEM245Q9H330 911 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 TM7SF3Q9NS93 570 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 HESX1Q9UBX0 185 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 LHX6Q9UPM6 363 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 HBS1LQ9Y450 684 aaKnown RBP19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 IGSF10Q6WRI0 2623 aa19.22■□□□□ 0.67
SSSCA1-206ENST00000531405 A0A1B0GVT2 93 aa19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 PIK3R2O00459 728 aa19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 CER1O95813 267 aa19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 LCP1P13796 627 aa19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 CSNK1EP49674 416 aaKnown RBP19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 COL9A2Q14055 689 aaPredicted RBP19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 E2F5Q15329 346 aa19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 PROSER1Q86XN7 944 aa19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 SIX6OS1Q8N1H7 587 aa19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 WFDC5Q8TCV5 224 aa19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 TMA16Q96EY4 203 aaKnown RBP19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 GGA2Q9UJY4 613 aa19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 STOML2Q9UJZ1 356 aa19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 COQ4Q9Y3A0 265 aa19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 FASNP49327 2511 aaKnown RBP19.21■□□□□ 0.67
SSSCA1-206ENST00000531405 O00370 1275 aa19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 GABBR2O75899 941 aa19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 RGS7P49802 495 aa19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 PMS1P54277 932 aaKnown RBP19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 PTPRNQ16849 979 aa19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 ADGRF1Q5T601 910 aa19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 ANKRD40Q6AI12 368 aa19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 RFWD3Q6PCD5 774 aa19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 LRSAM1Q6UWE0 723 aa19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 UBR7Q8N806 425 aa19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 WFIKKN2Q8TEU8 576 aa19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 SCAND2PQ9GZW5 306 aaPredicted RBP19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 ABCC13Q9NSE7 274 aa19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 PLA2G4CQ9UP65 541 aa19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 APOBEC2Q9Y235 224 aaKnown RBP19.2■□□□□ 0.66
SSSCA1-206ENST00000531405 BPTFQ12830 3046 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 GOLGA6L7A0A1B0GV03 622 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 TRIM49BA6NDI0 452 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 SLC16A3O15427 465 aaKnown RBP19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 CALCAP01258 141 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 ZNF883P0CG24 379 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 VDRP11473 427 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 PABPC1P11940 636 aaKnown RBP19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 CD70P32970 193 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 DAOAP59103 153 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 MBLAC2Q68D91 279 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 IL27RAQ6UWB1 636 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 LAYNQ6UX15 382 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 CCNI2Q6ZMN8 369 aaPredicted RBP19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 KIAA0907Q7Z7F0 614 aaPredicted RBP19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 GLRX5Q86SX6 157 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 KCTD13Q8WZ19 329 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 TFAP2BQ92481 460 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 ERCC4Q92889 916 aaPredicted RBP19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 MTG2Q9H4K7 406 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 PRSS16Q9NQE7 514 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 SNX11Q9Y5W9 270 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 DOCK9Q9BZ29 2069 aa19.19■□□□□ 0.66
SSSCA1-206ENST00000531405 GOLGA8CPA6NN73 597 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 TBL1XO60907 577 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 SETSIPP0DME0 302 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 SLC6A4P31645 630 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 AFF3P51826 1226 aaKnown RBP19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 ZNF445P59923 1031 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 YWHAEP62258 255 aaKnown RBP19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 RPS14P62263 151 aaKnown RBP19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 KIF19Q2TAC6 998 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 PKDCCQ504Y2 493 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 AHI1Q8N157 1196 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 BAHD1Q8TBE0 780 aaPredicted RBP19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 CLEC4CQ8WTT0 213 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 SLC35C1Q96A29 364 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 TSG101Q99816 390 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 PCED1AQ9H1Q7 454 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 CNGB3Q9NQW8 809 aa19.18■□□□□ 0.66
SSSCA1-206ENST00000531405 TOR4AQ9NXH8 423 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms