RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 TRIM62Q9BVG3 475 aa19.43■□□□□ 0.7
GMDS-208ENST00000530927 RAB6CQ9H0N0 254 aa19.43■□□□□ 0.7
GMDS-208ENST00000530927 METTL5Q9NRN9 209 aaKnown RBP19.43■□□□□ 0.7
GMDS-208ENST00000530927 IFNKQ9P0W0 207 aa19.43■□□□□ 0.7
GMDS-208ENST00000530927 WASH3PC4AMC7 463 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 M0QYT0 321 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 MMP8P22894 467 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 PBX1P40424 430 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 MATKP42679 507 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 NUMBP49757 651 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 UBASH3AP57075 661 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 TPM4P67936 248 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 CLEC16AQ2KHT3 1053 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 ZDHHC17Q8IUH5 632 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 SUMF1Q8NBK3 374 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 RNF214Q8ND24 703 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 TBCBQ99426 244 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 NPY6RQ99463 290 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 TMPRSS4Q9NRS4 437 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 PIGVQ9NUD9 493 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 TAS2R14Q9NYV8 317 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.42■□□□□ 0.7
GMDS-208ENST00000530927 I6L893 689 aaPredicted RBP19.42■□□□□ 0.7
GMDS-208ENST00000530927 APOEP02649 317 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 FERP16591 822 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 HLA-FP30511 346 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 NOS2P35228 1153 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 SULT1E1P49888 294 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 SNX16P57768 344 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 CRY1Q16526 586 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 MS4A13Q5J8X5 152 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 ANO7Q6IWH7 933 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 LONP2Q86WA8 852 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 CIR1Q86X95 450 aaPredicted RBP19.42■□□□□ 0.7
GMDS-208ENST00000530927 JOSD2Q8TAC2 188 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 RNF34Q969K3 372 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 CFAP57Q96MR6 1250 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 SYT11Q9BT88 431 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 FAM126AQ9BYI3 521 aaPredicted RBP19.42■□□□□ 0.7
GMDS-208ENST00000530927 TPSD1Q9BZJ3 242 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 CACNA2D2Q9NY47 1150 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 TMEM59LQ9UK28 342 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 INVSQ9Y283 1065 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 SLC27A6Q9Y2P4 619 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 SNX10Q9Y5X0 201 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 RAD54BQ9Y620 910 aa19.42■□□□□ 0.7
GMDS-208ENST00000530927 CFAP54Q96N23 3096 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 MYO18AQ92614 2054 aaKnown RBP19.41■□□□□ 0.7
GMDS-208ENST00000530927 KCNU1A8MYU2 1149 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 LMNAP02545 664 aaKnown RBP19.41■□□□□ 0.7
GMDS-208ENST00000530927 CD70P32970 193 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 IRAK1P51617 712 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 NRLP54845 237 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 CENPCQ03188 943 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 WDR5BQ86VZ2 330 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 CHSY1Q86X52 802 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 LGI2Q8N0V4 545 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 TSTD1Q8NFU3 115 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 AZIN2Q96A70 460 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 ABCB8Q9NUT2 735 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 STARD13Q9Y3M8 1113 aa19.41■□□□□ 0.7
GMDS-208ENST00000530927 DCLK1O15075 740 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 ADCY5O95622 1261 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 APBB3O95704 486 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 SKILP12757 684 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 TACR2P21452 398 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 HOXA6P31267 233 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 ASIC2Q16515 512 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 SH3PXD2AQ5TCZ1 1133 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 KIAA1211LQ6NV74 962 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 TRIM72Q6ZMU5 477 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 ANKS1BQ7Z6G8 1248 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 DCLK2Q8N568 766 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 MDGA1Q8NFP4 955 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 BTN2A3PQ96KV6 586 aa19.4■□□□□ 0.7
GMDS-208ENST00000530927 PRMT1Q99873 361 aaKnown RBP19.4■□□□□ 0.7
GMDS-208ENST00000530927 XPO4Q9C0E2 1151 aaKnown RBP19.4■□□□□ 0.7
GMDS-208ENST00000530927 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.4■□□□□ 0.74e-6■□□□□ 11.2
GMDS-208ENST00000530927 SMG5Q9UPR3 1016 aaKnown RBP19.4■□□□□ 0.7
GMDS-208ENST00000530927 TMCO5BA8MYB1 307 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 CCR1P32246 355 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 GBP1P32455 592 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 NSFP46459 744 aaKnown RBP19.39■□□□□ 0.69
GMDS-208ENST00000530927 DGKEP52429 567 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 C15orf59Q2T9L4 293 aaPredicted RBP19.39■□□□□ 0.69
GMDS-208ENST00000530927 PREPLQ4J6C6 727 aaPredicted RBP19.39■□□□□ 0.69
GMDS-208ENST00000530927 FSCBQ5H9T9 825 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 RNF43Q68DV7 783 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 PRR23BQ6ZRT6 265 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 MON1BQ7L1V2 547 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 ZNF571Q7Z3V5 609 aaPredicted RBP19.39■□□□□ 0.69
GMDS-208ENST00000530927 C14orf80Q86SX3 495 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 CHPFQ8IZ52 775 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 CARNMT1Q8N4J0 409 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 CAMKK1Q8N5S9 505 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 MSANTD4Q8NCY6 345 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 CYB5D2Q8WUJ1 264 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 CPLX3Q8WVH0 158 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 NT5C3BQ969T7 300 aa19.39■□□□□ 0.69
GMDS-208ENST00000530927 CIPCQ9C0C6 399 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms