RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ZNF516Q92618 1163 aa10.91□□□□□ -0.66
COPB1-207ENST00000529866 SLC6A18Q96N87 628 aa10.91□□□□□ -0.66
COPB1-207ENST00000529866 SDCBP2Q9H190 292 aa10.91□□□□□ -0.66
COPB1-207ENST00000529866 TMEM245Q9H330 911 aa10.91□□□□□ -0.66
COPB1-207ENST00000529866 AASDHPPTQ9NRN7 309 aa10.91□□□□□ -0.66
COPB1-207ENST00000529866 TFIP11Q9UBB9 837 aaKnown RBP10.91□□□□□ -0.66
COPB1-207ENST00000529866 CLEC4EQ9ULY5 219 aa10.91□□□□□ -0.66
COPB1-207ENST00000529866 SCML1Q9UN30 329 aa10.91□□□□□ -0.66
COPB1-207ENST00000529866 CLCA2Q9UQC9 943 aa10.91□□□□□ -0.66
COPB1-207ENST00000529866 MGAQ8IWI9 3026 aa10.91□□□□□ -0.66
COPB1-207ENST00000529866 FAM47DPA6NHR8 397 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 LRRC72A6NJI9 287 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 HHLA1C9JL84 531 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 CBX4O00257 560 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 RNASEH1O60930 286 aaKnown RBP10.9□□□□□ -0.66
COPB1-207ENST00000529866 KIF20AO95235 890 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 RPN1P04843 607 aaKnown RBP10.9□□□□□ -0.66
COPB1-207ENST00000529866 IGHV4-34P06331 123 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 ATP5BP06576 529 aaKnown RBP10.9□□□□□ -0.66
COPB1-207ENST00000529866 GLDCP23378 1020 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 EPHA8P29322 1005 aaPredicted RBP10.9□□□□□ -0.66
COPB1-207ENST00000529866 CASP1P29466 404 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 CASP4P49662 377 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 PCBP4P57723 403 aaKnown RBP10.9□□□□□ -0.66
COPB1-207ENST00000529866 RPS14P62263 151 aaKnown RBP10.9□□□□□ -0.66
COPB1-207ENST00000529866 KCNH2Q12809 1159 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 PKP1Q13835 747 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 SGSM1Q2NKQ1 1148 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 MPPE1Q53F39 396 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 SLC45A4Q5BKX6 768 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 TMEM215Q68D42 235 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 SHC4Q6S5L8 630 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 CHST9Q7L1S5 443 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 EPM2AIP1Q7L775 607 aaPredicted RBP10.9□□□□□ -0.66
COPB1-207ENST00000529866 SCD5Q86SK9 330 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 ERICH1Q86X53 443 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 C12orf56Q8IXR9 622 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 CACTIN-AS1Q8N1I8 211 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 EID2Q8N6I1 236 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 ZNF366Q8N895 744 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 ZNF248Q8NDW4 579 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 GOLGA5Q8TBA6 731 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 CYB5D2Q8WUJ1 264 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 TAF4BQ92750 862 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 PLD4Q96BZ4 506 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 ARID3AQ99856 593 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 ORAI3Q9BRQ5 295 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 GZF1Q9H116 711 aaPredicted RBP10.9□□□□□ -0.66
COPB1-207ENST00000529866 MARCH2Q9P0N8 246 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 HMGXB4Q9UGU5 601 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 SUN2Q9UH99 717 aa10.9□□□□□ -0.66
COPB1-207ENST00000529866 TPX2Q9ULW0 747 aaKnown RBP10.9□□□□□ -0.66
COPB1-207ENST00000529866 PTPN13Q12923 2485 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 SLC12A8A0AV02 714 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 ARHGAP6O43182 974 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 DLDP09622 509 aaKnown RBP10.89□□□□□ -0.67
COPB1-207ENST00000529866 CKMT2P17540 419 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 HOXD9P28356 352 aaPredicted RBP10.89□□□□□ -0.67
COPB1-207ENST00000529866 CD38P28907 300 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 HLA-FP30511 346 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 HARS2P49590 506 aaKnown RBP10.89□□□□□ -0.67
COPB1-207ENST00000529866 KCNC4Q03721 635 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 FOXD4L6Q3SYB3 417 aaPredicted RBP10.89□□□□□ -0.67
COPB1-207ENST00000529866 PRAMEF14Q5SWL7 426 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 PCSK4Q6UW60 755 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 FOXD4L3Q6VB84 417 aaPredicted RBP10.89□□□□□ -0.67
COPB1-207ENST00000529866 FAM217AQ8IXS0 508 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 ZNF557Q8N988 423 aaPredicted RBP10.89□□□□□ -0.67
COPB1-207ENST00000529866 RFFLQ8WZ73 363 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 TSC1Q92574 1164 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 DHX58Q96C10 678 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 CYFIP2Q96F07 1278 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 NT5C1AQ9BXI3 368 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 IMPG2Q9BZV3 1241 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 PABPC3Q9H361 631 aaKnown RBP10.89□□□□□ -0.67
COPB1-207ENST00000529866 CUEDC2Q9H467 287 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 ZSCAN16Q9H4T2 348 aaPredicted RBP10.89□□□□□ -0.67
COPB1-207ENST00000529866 PRSS16Q9NQE7 514 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 ABCB8Q9NUT2 735 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 FBXL12Q9NXK8 326 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 ADAMTS1Q9UHI8 967 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 GGA2Q9UJY4 613 aa10.89□□□□□ -0.67
COPB1-207ENST00000529866 LRRIQ3A6PVS8 624 aaPredicted RBP10.88□□□□□ -0.67
COPB1-207ENST00000529866 B8ZZF3 427 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 SPTLC2O15270 562 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 C4BPAP04003 597 aaKnown RBP10.88□□□□□ -0.67
COPB1-207ENST00000529866 PABPC1P11940 636 aaKnown RBP10.88□□□□□ -0.67
COPB1-207ENST00000529866 C6P13671 934 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 ASPAP45381 313 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 ST8SIA6P61647 398 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 CLDN10P78369 228 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 E2F1Q01094 437 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 INCA1Q0VD86 236 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 MAPK8IP2Q13387 824 aaPredicted RBP10.88□□□□□ -0.67
COPB1-207ENST00000529866 STK38Q15208 465 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 PKDCCQ504Y2 493 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 HS1BP3Q53T59 392 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 NCEH1Q6PIU2 408 aa10.88□□□□□ -0.67
COPB1-207ENST00000529866 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.88□□□□□ -0.67
COPB1-207ENST00000529866 DCBLD1Q8N8Z6 715 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms