RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 ANKRD40Q6AI12 368 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 MSANTD2Q6P1R3 559 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 TMEM270Q6UE05 265 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 LCLAT1Q6UWP7 414 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 CHST9Q7L1S5 443 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 UNC45BQ8IWX7 931 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 FMR1NBQ8N0W7 255 aaPredicted RBP16.29■□□□□ 0.2
CTSB-215ENST00000528965 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.29■□□□□ 0.2
CTSB-215ENST00000528965 RBBP8NLQ8NC74 664 aaPredicted RBP16.29■□□□□ 0.2
CTSB-215ENST00000528965 UBA3Q8TBC4 463 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 SNX19Q92543 992 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 NDRG1Q92597 394 aaKnown RBP16.29■□□□□ 0.2
CTSB-215ENST00000528965 DDX50Q9BQ39 737 aaKnown RBP16.29■□□□□ 0.2
CTSB-215ENST00000528965 ABCB8Q9NUT2 735 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 SFMBT1Q9UHJ3 866 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 GGA2Q9UJY4 613 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 APOBEC2Q9Y235 224 aaKnown RBP16.29■□□□□ 0.2
CTSB-215ENST00000528965 CKAP5Q14008 2032 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 ADAMTS9Q9P2N4 1935 aa16.29■□□□□ 0.2
CTSB-215ENST00000528965 PCNX2A6NKB5 2137 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 FRYQ5TBA9 3013 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 KCNJ18B7U540 433 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 M0QYV0 167 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 IRAK2O43187 625 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 MSI1O43347 362 aaKnown RBP16.28■□□□□ 0.2
CTSB-215ENST00000528965 SH3BP5O60239 455 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 FBXO21O94952 628 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 ZNF883P0CG24 379 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 PABPC1P11940 636 aaKnown RBP16.28■□□□□ 0.2
CTSB-215ENST00000528965 LCP1P13796 627 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 HLA-FP30511 346 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 MATKP42679 507 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 FMO5P49326 533 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 NUCB2P80303 420 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 CCDC40Q4G0X9 1142 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 MPP7Q5T2T1 576 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 RAB44Q7Z6P3 723 aaPredicted RBP16.28■□□□□ 0.2
CTSB-215ENST00000528965 FAM124AQ86V42 546 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 UBR7Q8N806 425 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 CEP63Q96MT8 703 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 EIF2B4Q9UI10 523 aaKnown RBP16.28■□□□□ 0.2
CTSB-215ENST00000528965 ZFHX4Q86UP3 3567 aa16.28■□□□□ 0.2
CTSB-215ENST00000528965 PMM2O15305 246 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 DNTTP04053 509 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 DLDP09622 509 aaKnown RBP16.27■□□□□ 0.2
CTSB-215ENST00000528965 FTH1P19P0C7X4 201 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 HLA-EP13747 358 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 POLR2EP19388 210 aaKnown RBP16.27■□□□□ 0.2
CTSB-215ENST00000528965 AFF3P51826 1226 aaKnown RBP16.27■□□□□ 0.2
CTSB-215ENST00000528965 PMS1P54277 932 aaKnown RBP16.27■□□□□ 0.2
CTSB-215ENST00000528965 FAM193AP78312 1265 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 RING1Q06587 406 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 TEAD4Q15561 434 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 PKDCCQ504Y2 493 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 TMEM215Q68D42 235 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 MBLAC2Q68D91 279 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 CCDC117Q8IWD4 279 aaPredicted RBP16.27■□□□□ 0.2
CTSB-215ENST00000528965 PPM1KQ8N3J5 372 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 CHCHD4Q8N4Q1 142 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 HJURPQ8NCD3 748 aaPredicted RBP16.27■□□□□ 0.2
CTSB-215ENST00000528965 TMEM245Q9H330 911 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 GAREM1Q9H706 876 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.27■□□□□ 0.2
CTSB-215ENST00000528965 PCDHB4Q9Y5E5 795 aa16.27■□□□□ 0.2
CTSB-215ENST00000528965 CFAP47Q6ZTR5 3102 aa16.27■□□□□ 0.19
CTSB-215ENST00000528965 FAM221BA6H8Z2 402 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 TRIM49BA6NDI0 452 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 P4HA2O15460 535 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 SART1O43290 800 aaKnown RBP16.26■□□□□ 0.19
CTSB-215ENST00000528965 LTFP02788 710 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 RGS7P49802 495 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 ST8SIA6P61647 398 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 SFSWAPQ12872 951 aaKnown RBP16.26■□□□□ 0.19
CTSB-215ENST00000528965 CNGA2Q16280 664 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 ADIPOR2Q86V24 386 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 MFN1Q8IWA4 741 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 SPATA20Q8TB22 786 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 SETD7Q8WTS6 366 aaKnown RBP16.26■□□□□ 0.19
CTSB-215ENST00000528965 CYB5D2Q8WUJ1 264 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 ADAMTS14Q8WXS8 1223 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 DHTKD1Q96HY7 919 aaPredicted RBP16.26■□□□□ 0.19
CTSB-215ENST00000528965 HSFY1Q96LI6 401 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 TIGD1Q96MW7 591 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 CAMK1GQ96NX5 476 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 SERPINB11Q96P15 392 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 TRIM62Q9BVG3 475 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 BTBD1Q9H0C5 482 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 SUN2Q9UH99 717 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 PCDHGB2Q9Y5G2 931 aa16.26■□□□□ 0.19
CTSB-215ENST00000528965 BICDL2A1A5D9 508 aa16.25■□□□□ 0.19
CTSB-215ENST00000528965 SRRM3A6NNA2 597 aaPredicted RBP16.25■□□□□ 0.19
CTSB-215ENST00000528965 FLRT2O43155 660 aa16.25■□□□□ 0.19
CTSB-215ENST00000528965 TBL1XO60907 577 aa16.25■□□□□ 0.19
CTSB-215ENST00000528965 SEMA4FO95754 770 aa16.25■□□□□ 0.19
CTSB-215ENST00000528965 IGLV3-27P01718 113 aa16.25■□□□□ 0.19
CTSB-215ENST00000528965 ASLP04424 464 aa16.25■□□□□ 0.19
CTSB-215ENST00000528965 TBX4P57082 545 aa16.25■□□□□ 0.19
CTSB-215ENST00000528965 SUZ12Q15022 739 aaKnown RBP16.25■□□□□ 0.19
CTSB-215ENST00000528965 ZNF776Q68DI1 518 aaPredicted RBP16.25■□□□□ 0.19
CTSB-215ENST00000528965 KIAA0907Q7Z7F0 614 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms