RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 CHST9Q7L1S5 443 aa24.6■■□□□ 1.53
CPSF1-202ENST00000527827 KIAA0907Q7Z7F0 614 aaPredicted RBP24.6■■□□□ 1.53
CPSF1-202ENST00000527827 ADIPOR2Q86V24 386 aa24.6■■□□□ 1.53
CPSF1-202ENST00000527827 ZNF366Q8N895 744 aa24.6■■□□□ 1.53
CPSF1-202ENST00000527827 WFIKKN2Q8TEU8 576 aa24.6■■□□□ 1.53
CPSF1-202ENST00000527827 EDEM1Q92611 657 aa24.6■■□□□ 1.53
CPSF1-202ENST00000527827 CCDC86Q9H6F5 360 aaKnown RBP24.6■■□□□ 1.53
CPSF1-202ENST00000527827 YJEFN3A6XGL0 299 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 E7ENQ6 273 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 DKK1O94907 266 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 BCAT1P54687 386 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 ADIGQ0VDE8 80 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 PTPRNQ16849 979 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 CBWD6Q4V339 395 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 CBWD3Q5JTY5 395 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 CBWD5Q5RIA9 395 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 BSPRYQ5W0U4 402 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 C19orf48Q6RUI8 117 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 ZC3H3Q8IXZ2 948 aaKnown RBP24.59■■□□□ 1.53
CPSF1-202ENST00000527827 SMYD4Q8IYR2 804 aaPredicted RBP24.59■■□□□ 1.53
CPSF1-202ENST00000527827 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.59■■□□□ 1.53
CPSF1-202ENST00000527827 SNX19Q92543 992 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 TMA16Q96EY4 203 aaKnown RBP24.59■■□□□ 1.53
CPSF1-202ENST00000527827 GOLPH3LQ9H4A5 285 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 LRRC4Q9HBW1 653 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 ABCB8Q9NUT2 735 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.59■■□□□ 1.53
CPSF1-202ENST00000527827 ZDHHC9Q9Y397 364 aa24.59■■□□□ 1.53
CPSF1-202ENST00000527827 FLRT2O43155 660 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 STX10O60499 249 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 ATXN1LP0C7T5 689 aaKnown RBP24.58■■□□□ 1.53
CPSF1-202ENST00000527827 SGSHP51688 502 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 AFF3P51826 1226 aaKnown RBP24.58■■□□□ 1.53
CPSF1-202ENST00000527827 ZNF445P59923 1031 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 KRT85P78386 507 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 BST2Q10589 180 aaKnown RBP24.58■■□□□ 1.53
CPSF1-202ENST00000527827 KIF19Q2TAC6 998 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 SGO2Q562F6 1265 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 MDM1Q8TC05 714 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 RHBDD1Q8TEB9 315 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 RNF139Q8WU17 664 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 PRSS16Q9NQE7 514 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 GGA2Q9UJY4 613 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 PLA2G4CQ9UP65 541 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 BTBD3Q9Y2F9 522 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 COQ4Q9Y3A0 265 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 SNX11Q9Y5W9 270 aa24.58■■□□□ 1.53
CPSF1-202ENST00000527827 MSI1O43347 362 aaKnown RBP24.57■■□□□ 1.52
CPSF1-202ENST00000527827 LATS1O95835 1130 aa24.57■■□□□ 1.52
CPSF1-202ENST00000527827 EPB41P11171 864 aaKnown RBP24.57■■□□□ 1.52
CPSF1-202ENST00000527827 RPS14P62263 151 aaKnown RBP24.57■■□□□ 1.52
CPSF1-202ENST00000527827 CUL2Q13617 745 aa24.57■■□□□ 1.52
CPSF1-202ENST00000527827 ADGRF1Q5T601 910 aa24.57■■□□□ 1.52
CPSF1-202ENST00000527827 TMPRSS7Q7RTY8 843 aa24.57■■□□□ 1.52
CPSF1-202ENST00000527827 UBA3Q8TBC4 463 aa24.57■■□□□ 1.52
CPSF1-202ENST00000527827 WFDC5Q8TCV5 224 aa24.57■■□□□ 1.52
CPSF1-202ENST00000527827 IPO9Q96P70 1041 aaKnown RBP24.57■■□□□ 1.52
CPSF1-202ENST00000527827 CDC6Q99741 560 aa24.57■■□□□ 1.52
CPSF1-202ENST00000527827 TM9SF3Q9HD45 589 aa24.57■■□□□ 1.52
CPSF1-202ENST00000527827 OSGEPQ9NPF4 335 aa24.57■■□□□ 1.52
CPSF1-202ENST00000527827 HESX1Q9UBX0 185 aa24.57■■□□□ 1.52
CPSF1-202ENST00000527827 GOLGA4Q13439 2230 aaKnown RBP24.56■■□□□ 1.52
CPSF1-202ENST00000527827 CETN3O15182 167 aa24.56■■□□□ 1.52
CPSF1-202ENST00000527827 PABPC1P11940 636 aaKnown RBP24.56■■□□□ 1.52
CPSF1-202ENST00000527827 ACAP1Q15027 740 aa24.56■■□□□ 1.52
CPSF1-202ENST00000527827 MBLAC2Q68D91 279 aa24.56■■□□□ 1.52
CPSF1-202ENST00000527827 AHI1Q8N157 1196 aa24.56■■□□□ 1.52
CPSF1-202ENST00000527827 KCTD13Q8WZ19 329 aa24.56■■□□□ 1.52
CPSF1-202ENST00000527827 BIRC7Q96CA5 298 aa24.56■■□□□ 1.52
CPSF1-202ENST00000527827 ABCC13Q9NSE7 274 aa24.56■■□□□ 1.52
CPSF1-202ENST00000527827 TP53BP1Q12888 1972 aaPredicted RBP24.55■■□□□ 1.52
CPSF1-202ENST00000527827 O00370 1275 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 GABBR2O75899 941 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 ZNF202O95125 648 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 SEMA4FO95754 770 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 DLDP09622 509 aaKnown RBP24.55■■□□□ 1.52
CPSF1-202ENST00000527827 CD19P15391 556 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 DAOAP59103 153 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 ZBTB16Q05516 673 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 PKDCCQ504Y2 493 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 SCML4Q8N228 414 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 UBR7Q8N806 425 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 BTBD1Q9H0C5 482 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 FBRSQ9HAH7 460 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 ANKRD6Q9Y2G4 727 aa24.55■■□□□ 1.52
CPSF1-202ENST00000527827 A0A1W2PQ27 194 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 A0A1W2PQ64 194 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 CD70P32970 193 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 GRIA4P48058 902 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 TEAD4Q15561 434 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 DCAF17Q5H9S7 520 aaPredicted RBP24.54■■□□□ 1.52
CPSF1-202ENST00000527827 KCNT1Q5JUK3 1230 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 TCERG1LQ5VWI1 586 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 MSANTD2Q6P1R3 559 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 RFWD3Q6PCD5 774 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 LAYNQ6UX15 382 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 SIX6OS1Q8N1H7 587 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 ORAI3Q9BRQ5 295 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 CNGB3Q9NQW8 809 aa24.54■■□□□ 1.52
CPSF1-202ENST00000527827 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms