RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 IKBKBO14920 756 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 IGHV4-34P06331 123 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 ITGAVP06756 1048 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 HLA-FP30511 346 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 C8orf34Q49A92 452 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 TTC31Q49AM3 519 aaPredicted RBP12.86□□□□□ -0.35
SRPRA-202ENST00000527817 ERICH6BQ5W0A0 696 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 KIAA0895LQ68EN5 471 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 FBXL19Q6PCT2 694 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 USP30Q70CQ3 517 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 SV2AQ7L0J3 742 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 GATAD2AQ86YP4 633 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 SLC9A9Q8IVB4 645 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.86□□□□□ -0.35
SRPRA-202ENST00000527817 IQUBQ8NA54 791 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 TMC2Q8TDI7 906 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 SAP25Q8TEE9 199 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 CYB5D2Q8WUJ1 264 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 PLD4Q96BZ4 506 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 SCML1Q9UN30 329 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 NCKAP1Q9Y2A7 1128 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 MYLKQ15746 1914 aa12.86□□□□□ -0.35
SRPRA-202ENST00000527817 PVALEFA0A1B0GWK0 134 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 SLC12A8A0AV02 714 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 J3QKU1 62 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 YKT6O15498 198 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 ATP5BP06576 529 aaKnown RBP12.85□□□□□ -0.35
SRPRA-202ENST00000527817 DLDP09622 509 aaKnown RBP12.85□□□□□ -0.35
SRPRA-202ENST00000527817 ABCB4P21439 1286 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 HOXD9P28356 352 aaPredicted RBP12.85□□□□□ -0.35
SRPRA-202ENST00000527817 ACADVLP49748 655 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 ZNF445P59923 1031 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 DLG4P78352 724 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 CFHR1Q03591 330 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 SFSWAPQ12872 951 aaKnown RBP12.85□□□□□ -0.35
SRPRA-202ENST00000527817 DNAJC3Q13217 504 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 ILKQ13418 452 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 CUL4AQ13619 759 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 SHBQ15464 509 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 TRIP4Q15650 581 aaPredicted RBP12.85□□□□□ -0.35
SRPRA-202ENST00000527817 PRAMEF14Q5SWL7 426 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 PPP1R26Q5T8A7 1209 aaPredicted RBP12.85□□□□□ -0.35
SRPRA-202ENST00000527817 SPOPLQ6IQ16 392 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 PCSK4Q6UW60 755 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 CHST9Q7L1S5 443 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 ADIPOR2Q86V24 386 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 ZNF366Q8N895 744 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 TMA16Q96EY4 203 aaKnown RBP12.85□□□□□ -0.35
SRPRA-202ENST00000527817 WBP1Q96G27 269 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 TMEM176AQ96HP8 235 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 DNAI2Q9GZS0 605 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 SLC39A2Q9NP94 309 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 STOML2Q9UJZ1 356 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 SPTA1P02549 2419 aa12.85□□□□□ -0.35
SRPRA-202ENST00000527817 C10orf142B7Z368 130 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 CBX4O00257 560 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 KIF20AO95235 890 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 HLA-DRAP01903 254 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 WNT1P04628 370 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 SLFN14P0C7P3 912 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 SYT1P21579 422 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 CD38P28907 300 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 ACTN2P35609 894 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 NASPP49321 788 aaPredicted RBP12.84□□□□□ -0.35
SRPRA-202ENST00000527817 GALCP54803 685 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 CLDN6P56747 220 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 RAB41Q5JT25 222 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 HES3Q5TGS1 186 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 MBLAC2Q68D91 279 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 ZNF776Q68DI1 518 aaPredicted RBP12.84□□□□□ -0.35
SRPRA-202ENST00000527817 PM20D1Q6GTS8 502 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 AHI1Q8N157 1196 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 LINC00301Q8NCQ3 95 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 DHX58Q96C10 678 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 ARID3AQ99856 593 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 BACH2Q9BYV9 841 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 RSPH9Q9H1X1 276 aaPredicted RBP12.84□□□□□ -0.35
SRPRA-202ENST00000527817 EBF2Q9HAK2 575 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 MAGEF1Q9HAY2 307 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 ABCB8Q9NUT2 735 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 MYO18BQ8IUG5 2567 aa12.84□□□□□ -0.35
SRPRA-202ENST00000527817 A0A1W2PR77 199 aa12.83□□□□□ -0.36
SRPRA-202ENST00000527817 ERVH48-1M5A8F1 160 aa12.83□□□□□ -0.36
SRPRA-202ENST00000527817 PPP6R2O75170 966 aa12.83□□□□□ -0.36
SRPRA-202ENST00000527817 PABPC1P11940 636 aaKnown RBP12.83□□□□□ -0.36
SRPRA-202ENST00000527817 POLR2EP19388 210 aaKnown RBP12.83□□□□□ -0.36
SRPRA-202ENST00000527817 RXRGP48443 463 aa12.83□□□□□ -0.36
SRPRA-202ENST00000527817 HARS2P49590 506 aaKnown RBP12.83□□□□□ -0.36
SRPRA-202ENST00000527817 YWHAGP61981 247 aaKnown RBP eCLIP12.83□□□□□ -0.36
SRPRA-202ENST00000527817 TLE3Q04726 772 aa12.83□□□□□ -0.36
SRPRA-202ENST00000527817 C1orf220Q5T0J3 134 aa12.83□□□□□ -0.36
SRPRA-202ENST00000527817 ADGRF1Q5T601 910 aa12.83□□□□□ -0.36
SRPRA-202ENST00000527817 RSRC2Q7L4I2 434 aaKnown RBP12.83□□□□□ -0.36
SRPRA-202ENST00000527817 ZC3H3Q8IXZ2 948 aaKnown RBP12.83□□□□□ -0.36
SRPRA-202ENST00000527817 EID2Q8N6I1 236 aa12.83□□□□□ -0.36
SRPRA-202ENST00000527817 RFFLQ8WZ73 363 aa12.83□□□□□ -0.36
SRPRA-202ENST00000527817 SLC6A18Q96N87 628 aa12.83□□□□□ -0.36
SRPRA-202ENST00000527817 IRX2Q9BZI1 471 aaPredicted RBP12.83□□□□□ -0.36
SRPRA-202ENST00000527817 PABPC3Q9H361 631 aaKnown RBP12.83□□□□□ -0.36
SRPRA-202ENST00000527817 ZSCAN16Q9H4T2 348 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms