RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 STILQ15468 1287 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 RRAGAQ7L523 313 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 SCML4Q8N228 414 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 ZCCHC9Q8N567 271 aaKnown RBP23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 OR2T3Q8NH03 318 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 DNASE2BQ8WZ79 361 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 IRGQQ8WZA9 623 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 ZDHHC5Q9C0B5 715 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 MIS12Q9H081 205 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 GGA2Q9UJY4 613 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 STOML2Q9UJZ1 356 aa23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.31■■□□□ 1.32
TRAPPC4-208ENST00000527680 METTL12A8MUP2 240 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 SH3BP5O60239 455 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 TBL1XO60907 577 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 CALCAP01258 141 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 ATP5BP06576 529 aaKnown RBP23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 RFWD3Q6PCD5 774 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 ZNF366Q8N895 744 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 RBBP8NLQ8NC74 664 aaPredicted RBP23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 NELFBQ8WX92 580 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 SNX19Q92543 992 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 KAT5Q92993 513 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 CAMK1GQ96NX5 476 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 STIM2Q9P246 746 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 EIF2B4Q9UI10 523 aaKnown RBP23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 ZMIZ1Q9ULJ6 1067 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 NFE2L3Q9Y4A8 694 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 USP24Q9UPU5 2620 aa23.3■■□□□ 1.32
TRAPPC4-208ENST00000527680 CEP295Q9C0D2 2601 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 PCDH15Q96QU1 1955 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 GOLGA6L7A0A1B0GV03 622 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 BICDL2A1A5D9 508 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 PMM2O15305 246 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 BCAT2O15382 392 aaPredicted RBP23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 LTFP02788 710 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 PABPC1P11940 636 aaKnown RBP23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 POLR2EP19388 210 aaKnown RBP23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 TBX4P57082 545 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 FAM193AP78312 1265 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 GRIK2Q13002 908 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 NUGGCQ68CJ6 796 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 MBLAC2Q68D91 279 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 MSANTD2Q6P1R3 559 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 AHI1Q8N157 1196 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 CLEC4CQ8WTT0 213 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 HSFY1Q96LI6 401 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 ST7Q9NRC1 585 aa23.29■■□□□ 1.32
TRAPPC4-208ENST00000527680 H0Y626 953 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 P4HA2O15460 535 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 GABBR2O75899 941 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 FBXO21O94952 628 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 TRIM16O95361 564 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 SGSHP51688 502 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 CAMK2GQ13555 558 aaPredicted RBP23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 TRIP6Q15654 476 aaKnown RBP23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 PIK3R6Q5UE93 754 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 ADIPOR2Q86V24 386 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 EHBP1Q8NDI1 1231 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 DDX50Q9BQ39 737 aaKnown RBP23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 ZSWIM1Q9BR11 485 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 LHX5Q9H2C1 402 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 TMEM245Q9H330 911 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 CKAP5Q14008 2032 aa23.28■■□□□ 1.32
TRAPPC4-208ENST00000527680 BIN1O00499 593 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 ACSL4O60488 711 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 IGLV3-19P01714 112 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 KRT5P13647 590 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 KCNH2Q12809 1159 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 TTI2Q6NXR4 508 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 CCDC117Q8IWD4 279 aaPredicted RBP23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 SCUBE3Q8IX30 993 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 ELOA2Q8IYF1 753 aaPredicted RBP23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 CHCHD4Q8N4Q1 142 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 KDF1Q8NAX2 398 aaPredicted RBP23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 LMO3Q8TAP4 145 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 SETD7Q8WTS6 366 aaKnown RBP23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 SUN2Q9UH99 717 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 KLK13Q9UKR3 277 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 CTNND2Q9UQB3 1225 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 NEUROG3Q9Y4Z2 214 aa23.27■■□□□ 1.32
TRAPPC4-208ENST00000527680 TYW5A2RUC4 315 aaKnown RBP23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 PPP1R3GB7ZBB8 358 aa23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 IRAK2O43187 625 aa23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 DLDP09622 509 aaKnown RBP23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 STX17P56962 302 aa23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 ZNF423Q2M1K9 1284 aa23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 MPP7Q5T2T1 576 aa23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 ARHGEF19Q8IW93 802 aa23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 MFN1Q8IWA4 741 aa23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 ZNF557Q8N988 423 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 FAM149B1Q96BN6 582 aa23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 GAREM1Q9H706 876 aa23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 PRSS16Q9NQE7 514 aa23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 MSRB2Q9Y3D2 182 aa23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.26■■□□□ 1.31
TRAPPC4-208ENST00000527680 TMEM8BA6NDV4 472 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 GJB3O75712 270 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 GNA14O95837 355 aa23.25■■□□□ 1.31
TRAPPC4-208ENST00000527680 DNTTP04053 509 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms