RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 GALCP54803 685 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 KCNJ12Q14500 433 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 PROX2Q3B8N5 592 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 TTC31Q49AM3 519 aaPredicted RBP17■□□□□ 0.31
CHMP4A-203ENST00000527154 CCDC73Q6ZRK6 1079 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 CCDC65Q8IXS2 484 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 HPS3Q969F9 1004 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 SKA1Q96BD8 255 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 MYO19Q96H55 970 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 LGMNQ99538 433 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 ADAMTS1Q9UHI8 967 aa17■□□□□ 0.31
CHMP4A-203ENST00000527154 WNT9AO14904 365 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 LZTS3O60299 673 aaPredicted RBP16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 CYBBP04839 570 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 ABCB4P21439 1286 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 CD38P28907 300 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 NDST1P52848 882 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 AP3M2P53677 418 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 PCBP4P57723 403 aaKnown RBP16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 NXPH1P58417 271 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 EHHADHQ08426 723 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 INCA1Q0VD86 236 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 NCOA4Q13772 614 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 TRIP4Q15650 581 aaPredicted RBP16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 CDCP2Q5VXM1 449 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 ZNF776Q68DI1 518 aaPredicted RBP16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 CNNM4Q6P4Q7 775 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 ZNF366Q8N895 744 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 MED8Q96G25 268 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 PABPC3Q9H361 631 aaKnown RBP16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 GDF3Q9NR23 364 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 FAM49BQ9NUQ9 324 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 NAGPAQ9UK23 515 aa16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 TPX2Q9ULW0 747 aaKnown RBP16.99■□□□□ 0.31
CHMP4A-203ENST00000527154 DLDP09622 509 aaKnown RBP16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 ARRB1P49407 418 aaPredicted RBP16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 CCR5P51681 352 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 ZNF445P59923 1031 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 ERVPABLB-1P60509 514 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 SKOR1P84550 965 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 BNIP3Q12983 259 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 LY6DQ14210 128 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 ARID5BQ14865 1188 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 IGF2-ASQ6U949 168 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 DENND1CQ8IV53 801 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 OXR1Q8N573 874 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 PARD3BQ8TEW8 1205 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 CYB5D2Q8WUJ1 264 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 TMEM174Q8WUU8 243 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 LMLNQ96KR4 655 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 TWNKQ96RR1 684 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 CPNE5Q9HCH3 593 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 SERGEFQ9UGK8 458 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 PLA2G4CQ9UP65 541 aa16.98■□□□□ 0.31
CHMP4A-203ENST00000527154 UBE4BO95155 1302 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 RALAP11233 206 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 ASPAP45381 313 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 CASP4P49662 377 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 CSRP3P50461 194 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 E2F1Q01094 437 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 FNDC3BQ53EP0 1204 aaKnown RBP16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 MPPE1Q53F39 396 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 NCEH1Q6PIU2 408 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 SCARA5Q6ZMJ2 495 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 CHST9Q7L1S5 443 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 DHX40Q8IX18 779 aaKnown RBP16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 DDI1Q8WTU0 396 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 FAM131CQ96AQ9 280 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 ELMO3Q96BJ8 720 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 PLD4Q96BZ4 506 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 CLIC6Q96NY7 704 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 TNMDQ9H2S6 317 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 ASCL3Q9NQ33 180 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 KBTBD4Q9NVX7 518 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 CGNQ9P2M7 1197 aaKnown RBP16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 FZD4Q9ULV1 537 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 CLIC4Q9Y696 253 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 PIEZO2Q9H5I5 2752 aa16.97■□□□□ 0.31
CHMP4A-203ENST00000527154 LRRIQ3A6PVS8 624 aaPredicted RBP16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 LATO43561 262 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 MT-CO3P00414 261 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 ASS1P00966 412 aaKnown RBP16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 TXLNAP40222 546 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 STAT6P42226 847 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 ARID5AQ03989 594 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 VAC14Q08AM6 782 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 ZACNQ401N2 412 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 ARHGAP40Q5TG30 622 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 BROXQ5VW32 411 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 SPATS2Q86XZ4 545 aaKnown RBP16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 LSMEM2Q8N112 164 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 AHI1Q8N157 1196 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 OR2T34Q8NGX1 318 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 TAF4BQ92750 862 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 CYFIP2Q96F07 1278 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 TMX3Q96JJ7 454 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 DPH1Q9BZG8 443 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 MARCH2Q9P0N8 246 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 SUN2Q9UH99 717 aa16.96■□□□□ 0.31
CHMP4A-203ENST00000527154 RASAL2Q9UJF2 1139 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms