RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 SYT1P21579 422 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 RACK1P63244 317 aaKnown RBP13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 MPPE1Q53F39 396 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 PPP1R26Q5T8A7 1209 aaPredicted RBP13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 HES3Q5TGS1 186 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 KIAA0895LQ68EN5 471 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 FAM217AQ8IXS0 508 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 LSM14AQ8ND56 463 aaKnown RBP13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 GANCQ8TET4 914 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 WFIKKN2Q8TEU8 576 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 ELF4Q99607 663 aaPredicted RBP13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 FBRSQ9HAH7 460 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 ABCB8Q9NUT2 735 aa13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 COL5A1P20908 1838 aaPredicted RBP13.59□□□□□ -0.23
CLNS1A-207ENST00000527133 CAPN9O14815 690 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 C1SP09871 688 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 C7P10643 843 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 CDK4P11802 303 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 NASPP49321 788 aaPredicted RBP13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 ACADVLP49748 655 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 YWHAGP61981 247 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 CUL4AQ13619 759 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 RTP5Q14D33 572 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 SHBQ15464 509 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 ZNF776Q68DI1 518 aaPredicted RBP13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 GPR155Q7Z3F1 870 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 ADIPOR2Q86V24 386 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 ARHGAP18Q8N392 663 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 EID2Q8N6I1 236 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 LINC00301Q8NCQ3 95 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 SNIP1Q8TAD8 396 aaKnown RBP13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 GOLGA1Q92805 767 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 PLD4Q96BZ4 506 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 NRSN2Q9GZP1 204 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 CYP3A43Q9HB55 503 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 APOBEC3GQ9HC16 384 aaKnown RBP13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 DMAC2Q9NW81 257 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 GGA2Q9UJY4 613 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 NCKAP1Q9Y2A7 1128 aa13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 TP53BP1Q12888 1972 aaPredicted RBP13.58□□□□□ -0.24
CLNS1A-207ENST00000527133 PLXNA2O75051 1894 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 TEX51A0A1B0GUA7 166 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 A0A1W2PPC4 97 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 SPTLC2O15270 562 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 WNT1P04628 370 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 DLDP09622 509 aaKnown RBP13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 PABPC1P11940 636 aaKnown RBP13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 HARS2P49590 506 aaKnown RBP13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 PDE4CQ08493 712 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 CUL4BQ13620 913 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 TRIP4Q15650 581 aaPredicted RBP13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 ZNF394Q53GI3 561 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 C1orf220Q5T0J3 134 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 MBLAC2Q68D91 279 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 FBXL19Q6PCT2 694 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 SHC4Q6S5L8 630 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 FMNL3Q8IVF7 1028 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 ZC3H3Q8IXZ2 948 aaKnown RBP13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 AHI1Q8N157 1196 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 TMC2Q8TDI7 906 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 SAP25Q8TEE9 199 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 SKA1Q96BD8 255 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 BACH2Q9BYV9 841 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 IMPG2Q9BZV3 1241 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 MTG2Q9H4K7 406 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 AASDHPPTQ9NRN7 309 aa13.57□□□□□ -0.24
CLNS1A-207ENST00000527133 NAV2Q8IVL1 2488 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 PVALEFA0A1B0GWK0 134 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 IKBKBO14920 756 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 POLR2DO15514 142 aaKnown RBP13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 BRINP1O60477 761 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 NR3C1P04150 777 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 ATP5BP06576 529 aaKnown RBP13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 AFMP43652 599 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 GALCP54803 685 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 CXADRP78310 365 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 CFHR1Q03591 330 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 CCDC173Q0VFZ6 552 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 CEP135Q66GS9 1140 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 NCEH1Q6PIU2 408 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 KIAA0907Q7Z7F0 614 aaPredicted RBP13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 PIGZQ86VD9 579 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 SLC9A9Q8IVB4 645 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 NDRG1Q92597 394 aaKnown RBP13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 FGF11Q92914 225 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 TMA16Q96EY4 203 aaKnown RBP13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 HEXIM2Q96MH2 286 aaKnown RBP13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 DNAI2Q9GZS0 605 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 NIF3L1Q9GZT8 377 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 RSPH9Q9H1X1 276 aaPredicted RBP13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 PABPC3Q9H361 631 aaKnown RBP13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 EBF2Q9HAK2 575 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 MAGEF1Q9HAY2 307 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 GDF3Q9NR23 364 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 FBXL12Q9NXK8 326 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 SERGEFQ9UGK8 458 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 SUN2Q9UH99 717 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 MTMR6Q9Y217 621 aa13.56□□□□□ -0.24
CLNS1A-207ENST00000527133 MYLKQ15746 1914 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms