RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 SYKP43405 635 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 TKTL1P51854 596 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 ZNF132P52740 706 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 COPAP53621 1224 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 SCAPQ12770 1279 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 E2F5Q15329 346 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 NFIL3Q16649 462 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 KRT39Q6A163 491 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 METTL3Q86U44 580 aaKnown RBP12.26□□□□□ -0.45
CAPN1-204ENST00000526468 KRT222Q8N1A0 295 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 CPXM2Q8N436 756 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 TTC39CQ8N584 583 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 ZNF366Q8N895 744 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 CCDC112Q8NEF3 446 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 CADM4Q8NFZ8 388 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 ADAMTS14Q8WXS8 1223 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 DNASE2BQ8WZ79 361 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 PIWIL1Q96J94 861 aaKnown RBP12.26□□□□□ -0.45
CAPN1-204ENST00000526468 SPATA32Q96LK8 384 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 ULBP1Q9BZM6 244 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 LHX5Q9H2C1 402 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 GAREM1Q9H706 876 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 IL21RQ9HBE5 538 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 CISHQ9NSE2 258 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 ELOVL2Q9NXB9 296 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 FBXO10Q9UK96 956 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 PCOLCE2Q9UKZ9 415 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 CLEC4EQ9ULY5 219 aa12.26□□□□□ -0.45
CAPN1-204ENST00000526468 RHOBTB3O94955 611 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 EPB41P11171 864 aaKnown RBP12.25□□□□□ -0.45
CAPN1-204ENST00000526468 HOXD9P28356 352 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-204ENST00000526468 BCAT1P54687 386 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 KRT85P78386 507 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 ADIGQ0VDE8 80 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 ENPP2Q13822 863 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 DCAF17Q5H9S7 520 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-204ENST00000526468 IL27RAQ6UWB1 636 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 FMNL3Q8IVF7 1028 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 SIX6OS1Q8N1H7 587 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 ZNF276Q8N554 614 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 SLC4A11Q8NBS3 891 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 RNF214Q8ND24 703 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 FBXL13Q8NEE6 735 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 ZNF397Q8NF99 534 aaPredicted RBP12.25□□□□□ -0.45
CAPN1-204ENST00000526468 OR2T3Q8NH03 318 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 CYB5D2Q8WUJ1 264 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 SEMA4DQ92854 862 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 FUCA2Q9BTY2 467 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 LRRC4Q9HBW1 653 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 ITM2CQ9NQX7 267 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 TM7SF3Q9NS93 570 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 OLA1Q9NTK5 396 aaKnown RBP12.25□□□□□ -0.45
CAPN1-204ENST00000526468 RCOR1Q9UKL0 485 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 HPSEQ9Y251 543 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 DOCK4Q8N1I0 1966 aa12.25□□□□□ -0.45
CAPN1-204ENST00000526468 A0A1B0GVT2 93 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 GOLGA8CPA6NN73 597 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 METTL12A8MUP2 240 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 LOC400499M0QZD8 3231 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 FLRT2O43155 660 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 MSI1O43347 362 aaKnown RBP12.24□□□□□ -0.45
CAPN1-204ENST00000526468 TSPAN3O60637 253 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 ZBED1O96006 694 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 IGLV3-19P01714 112 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 TPM1P09493 284 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 CD19P15391 556 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 CMA1P23946 247 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 GTF2H1P32780 548 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 HARS2P49590 506 aaKnown RBP12.24□□□□□ -0.45
CAPN1-204ENST00000526468 NDUFA8P51970 172 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 RAD23BP54727 409 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 GSDMDP57764 484 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 ENPEPQ07075 957 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 DPYDQ12882 1025 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 ADAM9Q13443 819 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 ACAP1Q15027 740 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 HLA-BQ31612 363 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 TTC31Q49AM3 519 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-204ENST00000526468 RAB41Q5JT25 222 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 TCERG1LQ5VWI1 586 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 TMEM215Q68D42 235 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 ARHGAP17Q68EM7 881 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 LAYNQ6UX15 382 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 FAM217AQ8IXS0 508 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 SMYD4Q8IYR2 804 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-204ENST00000526468 GUF1Q8N442 669 aaKnown RBP12.24□□□□□ -0.45
CAPN1-204ENST00000526468 WFIKKN2Q8TEU8 576 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 RNF139Q8WU17 664 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 GCN1Q92616 2671 aaKnown RBP12.24□□□□□ -0.45
CAPN1-204ENST00000526468 TATDN2Q93075 761 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 EEF2KMTQ96G04 330 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 TMEM176AQ96HP8 235 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 NUP58Q9BVL2 599 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 SLC2A11Q9BYW1 496 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 CCDC86Q9H6F5 360 aaKnown RBP12.24□□□□□ -0.45
CAPN1-204ENST00000526468 HESX1Q9UBX0 185 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 TSPAN16Q9UKR8 245 aa12.24□□□□□ -0.45
CAPN1-204ENST00000526468 TRPM6Q9BX84 2022 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 FAM221BA6H8Z2 402 aa12.23□□□□□ -0.45
CAPN1-204ENST00000526468 TAF4O00268 1085 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms