RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 BMPR2Q13873 1038 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 ZNF621Q6ZSS3 439 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 HIST3H2AQ7L7L0 130 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 PTAR1Q7Z6K3 402 aaPredicted RBP13.98□□□□□ -0.17
LRRK1-202ENST00000525284 ADGRF4Q8IZF3 695 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 HIST1H2ACQ93077 130 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 RPRD1AQ96P16 312 aaPredicted RBP13.98□□□□□ -0.17
LRRK1-202ENST00000525284 PI4K2AQ9BTU6 479 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 OR1G1P47890 313 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 POLD2P49005 469 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 AMER2Q8N7J2 671 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 OR6J1Q8NGC5 347 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 NKIRAS2Q9NYR9 191 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 TFR2Q9UP52 801 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 COG5Q9UP83 839 aa13.98□□□□□ -0.17
LRRK1-202ENST00000525284 M0QYT0 321 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 C2CD2LO14523 706 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 NCK1P16333 377 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 NPY2RP49146 381 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 MSLNQ13421 630 aaPredicted RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 CIAPIN1Q6FI81 312 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 THOC7Q6I9Y2 204 aaKnown RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 TMEM132CQ8N3T6 1108 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 CARNMT1Q8N4J0 409 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 TMEM106CQ9BVX2 250 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 KCNF1Q9H3M0 494 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 REEP1Q9H902 201 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 CHMP1AQ9HD42 196 aaPredicted RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 NUDT5Q9UKK9 219 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 TDRKHQ9Y2W6 561 aaKnown RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 AAR2Q9Y312 384 aaKnown RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 OR5F1O95221 314 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 KCNH1O95259 989 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 BMP10O95393 424 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 S100A2P29034 98 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 INO80DQ53TQ3 878 aaPredicted RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 PYHIN1Q6K0P9 492 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 TBC1D10CQ8IV04 446 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 C2orf69Q8N8R5 385 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 ACTRT2Q8TDY3 377 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 ZC3H10Q96K80 434 aaKnown RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 PABPC3Q9H361 631 aaKnown RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 ZMYM5Q9UJ78 669 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 SAMD9LQ8IVG5 1584 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 TTLL13PA6NNM8 815 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 KRT33AO76009 404 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 EYA4O95677 639 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 SRGNP10124 158 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 CDH3P22223 829 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 TOB2Q14106 344 aaPredicted RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 SULT1C3Q6IMI6 304 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 TRAPPC11Q7Z392 1133 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 TMPRSS6Q8IU80 811 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 FAM126BQ8IXS8 530 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 ATP6V0D2Q8N8Y2 350 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 MTFMTQ96DP5 389 aaKnown RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 FICDQ9BVA6 458 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 AHSPQ9NZD4 102 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 GIT1Q9Y2X7 761 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 CCDC189A1A4V9 331 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 CD3EAPO15446 510 aaKnown RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 MYL9P24844 172 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 PPP2R2BQ00005 443 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 SFSWAPQ12872 951 aaKnown RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 ZIK1Q3SY52 487 aaPredicted RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 DCP1BQ8IZD4 617 aaKnown RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 ZNF276Q8N554 614 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 TTC29Q8NA56 475 aaPredicted RBP13.97□□□□□ -0.17
LRRK1-202ENST00000525284 ACOT9Q9Y305 439 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 MYO5CQ9NQX4 1742 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 A0A0B4J269 797 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 SSU72P8A0A1W2PR75 194 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 MRASO14807 208 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 ATP4AP20648 1035 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 ITGALP20701 1170 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 MAGP20916 626 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 TUBB3Q13509 450 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 SHC4Q6S5L8 630 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 MFSD7Q6UXD7 560 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 FBXO30Q8TB52 745 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 TMBIM4Q9HC24 238 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 CDH9Q9ULB4 789 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 CLEC4AQ9UMR7 237 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 IRAK3Q9Y616 596 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 SYNMO15061 1565 aa13.97□□□□□ -0.17
LRRK1-202ENST00000525284 ETS1P14921 441 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 CHN2P52757 468 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 CBX3Q13185 183 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 XRCC4Q13426 336 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 PROSER3Q2NL68 480 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 TSPAN14Q8NG11 270 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 CLHC1Q8NHS4 586 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 CDRT15Q96T59 188 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 PNPLA8Q9NP80 782 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 ACSL4O60488 711 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 GLP2RO95838 553 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 TPBGLP0DKB5 382 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 CDC42P60953 191 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 GNA13Q14344 377 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 PPP1R18Q6NYC8 613 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms