RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TRIM43BA6NCK2 446 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 CES2O00748 559 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 RRHO14718 337 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 AKAP10O43572 662 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 OFD1O75665 1012 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 CBSLP0DN79 551 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 VCAM1P19320 739 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 HTR7P34969 479 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 CBSP35520 551 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 COPB1P53618 953 aaKnown RBP2.07□□□□□ -2.08
CD44-212ENST00000524922 PRKAG1P54619 331 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 GPC5P78333 572 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 CFHR3Q02985 330 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 ZNF91Q05481 1191 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 SLC13A2Q13183 592 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 SLC14A1Q13336 389 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 MTX1Q13505 466 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 ZNF750Q32MQ0 723 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 ANO6Q4KMQ2 910 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 C4orf46Q504U0 113 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 IFIT1BQ5T764 474 aaKnown RBP2.07□□□□□ -2.08
CD44-212ENST00000524922 ZNF783Q6ZMS7 281 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 DCDC5Q6ZRR9 648 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 USP49Q70CQ1 688 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 TFAP2DQ7Z6R9 452 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 TPH2Q8IWU9 490 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 KIAA0319LQ8IZA0 1049 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 ZBTB34Q8NCN2 500 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 OR6B3Q8NGW1 331 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 TRIM43Q96BQ3 446 aaPredicted RBP2.07□□□□□ -2.08
CD44-212ENST00000524922 RUNDC1Q96C34 613 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 P2RY11Q96G91 374 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 ZBTB45Q96K62 511 aaPredicted RBP2.07□□□□□ -2.08
CD44-212ENST00000524922 LYZL4Q96KX0 146 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 CCDC17Q96LX7 622 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 DPCDQ9BVM2 203 aaPredicted RBP2.07□□□□□ -2.08
CD44-212ENST00000524922 TM2D2Q9BX73 214 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 BRINP2Q9C0B6 783 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 NMRK2Q9NPI5 230 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 CCNL1Q9UK58 526 aaPredicted RBP2.07□□□□□ -2.08
CD44-212ENST00000524922 PNMA8BQ9ULN7 279 aaPredicted RBP2.07□□□□□ -2.08
CD44-212ENST00000524922 PCDH11XQ9BZA7 1347 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 PCDH11YQ9BZA8 1340 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 ADAMTSL1Q8N6G6 1762 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 KDRP35968 1356 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 NCOR1O75376 2440 aa2.07□□□□□ -2.08
CD44-212ENST00000524922 MKI67P46013 3256 aaKnown RBP2.06□□□□□ -2.08
CD44-212ENST00000524922 BRCA2P51587 3418 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 CEP290O15078 2479 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 FAM90A8PA6NJQ4 464 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 A6NNZ2 444 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 ZNF814B7Z6K7 855 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 H7C4K7 107 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 PHGDHO43175 533 aaKnown RBP2.06□□□□□ -2.08
CD44-212ENST00000524922 CCP110O43303 1012 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 TLX3O43711 291 aaPredicted RBP2.06□□□□□ -2.08
CD44-212ENST00000524922 TMPRSS11DO60235 418 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 PRAMEF2O60811 474 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 SRGAP2O75044 1071 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 GCATO75600 419 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 PARP1P09874 1014 aaKnown RBP2.06□□□□□ -2.08
CD44-212ENST00000524922 FAM90A13PP0C7W8 464 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 FAM90A24PP0C7X0 464 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 HGFP14210 728 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 EPHA3P29320 983 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 PLCD1P51178 756 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 COPAP53621 1224 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 SUMO2P61956 95 aaKnown RBP2.06□□□□□ -2.08
CD44-212ENST00000524922 ID2Q02363 134 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 PIN1Q13526 163 aaPredicted RBP2.06□□□□□ -2.08
CD44-212ENST00000524922 ODF3L2Q3SX64 289 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 CCDC157Q569K6 752 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 ASPHD1Q5U4P2 390 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 GRHL2Q6ISB3 625 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 APOA5Q6Q788 366 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 NPNTQ6UXI9 565 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 MAEAQ7L5Y9 396 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 ARFGAP1Q8N6T3 406 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 B4GALNT2Q8NHY0 566 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 NMD3Q96D46 503 aaKnown RBP2.06□□□□□ -2.08
CD44-212ENST00000524922 SELENOOQ9BVL4 669 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 B3GNT5Q9BYG0 378 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 ZNF518BQ9C0D4 1074 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 CDH19Q9H159 772 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 VPS33BQ9H267 617 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 TMEM60Q9H2L4 133 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 DHX36Q9H2U1 1008 aaKnown RBP2.06□□□□□ -2.08
CD44-212ENST00000524922 TMEM8AQ9HCN3 771 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 A1CFQ9NQ94 594 aaKnown RBP2.06□□□□□ -2.08
CD44-212ENST00000524922 COL20A1Q9P218 1284 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 DKK4Q9UBT3 224 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 FZD4Q9ULV1 537 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 CAPN11Q9UMQ6 739 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 CNTNAP2Q9UHC6 1331 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 PALLDQ8WX93 1383 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 TONSLQ96HA7 1378 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 KCPQ6ZWJ8 1503 aa2.06□□□□□ -2.08
CD44-212ENST00000524922 C4AP0C0L4 1744 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 C4BP0C0L5 1744 aa2.05□□□□□ -2.08
CD44-212ENST00000524922 SCN4AP35499 1836 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms