RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 SLC29A3Q9BZD2 475 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 BRD8Q9H0E9 1235 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 TAF1DQ9H5J8 278 aaPredicted RBP4.34□□□□□ -1.71
PCM1-220ENST00000523896 CCDC134Q9H6E4 229 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 SEPSECSQ9HD40 501 aaKnown RBP4.34□□□□□ -1.71
PCM1-220ENST00000523896 TMLHEQ9NVH6 421 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 SH3BP4Q9P0V3 963 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 FEM1BQ9UK73 627 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 SPATA31A1Q5TZJ5 1347 aa4.34□□□□□ -1.71
PCM1-220ENST00000523896 TCRBV5S1A1TA0A578 114 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 MBD3L5A6NJ08 208 aaPredicted RBP4.33□□□□□ -1.72
PCM1-220ENST00000523896 B9A039 149 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 FYB1O15117 783 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 C1QL1O75973 258 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 TK1P04183 234 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 CYP3A4P08684 503 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 ATF7P17544 494 aaPredicted RBP4.33□□□□□ -1.72
PCM1-220ENST00000523896 FAM3BP58499 235 aaPredicted RBP4.33□□□□□ -1.72
PCM1-220ENST00000523896 RPL15P61313 204 aaKnown RBP4.33□□□□□ -1.72
PCM1-220ENST00000523896 WDR5P61964 334 aaKnown RBP4.33□□□□□ -1.72
PCM1-220ENST00000523896 CUL4BQ13620 913 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 KCNB1Q14721 858 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 MFSD13AQ14CX5 517 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 SMAD1Q15797 465 aaKnown RBP4.33□□□□□ -1.72
PCM1-220ENST00000523896 EPHA10Q5JZY3 1008 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 ZNF569Q5MCW4 686 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 ANKRD40Q6AI12 368 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 DGAT2L7PQ6IED9 249 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 WDR93Q6P2C0 686 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 TMEM65Q6PI78 240 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 CYP26C1Q6V0L0 522 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 RRAGAQ7L523 313 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 SRRM1Q8IYB3 904 aaKnown RBP4.33□□□□□ -1.72
PCM1-220ENST00000523896 SLC2A12Q8TD20 617 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 HASPINQ8TF76 798 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 TRMT61AQ96FX7 289 aaKnown RBP4.33□□□□□ -1.72
PCM1-220ENST00000523896 HIC2Q96JB3 615 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 ADGRE3Q9BY15 652 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 ABHD16BQ9H3Z7 469 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 RASSF1Q9NS23 344 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 SAGE1Q9NXZ1 904 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.33□□□□□ -1.72
PCM1-220ENST00000523896 VPS4AQ9UN37 437 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 LZTS1Q9Y250 596 aa4.33□□□□□ -1.72
PCM1-220ENST00000523896 CCDC189A1A4V9 331 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 FAM90A20PA6NIJ5 464 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 C3orf70A6NLC5 250 aaPredicted RBP4.32□□□□□ -1.72
PCM1-220ENST00000523896 E7EVH7 732 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 POC1B-GALNT4F8VUJ3 575 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 UBE2Q2LH0YL09 131 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 CLIC1O00299 241 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 GCATO75600 419 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 TFRCP02786 760 aaKnown RBP4.32□□□□□ -1.72
PCM1-220ENST00000523896 CHRM5P08912 532 aaPredicted RBP4.32□□□□□ -1.72
PCM1-220ENST00000523896 NDUFS1P28331 727 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 GRK5P34947 590 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 AARSP49588 968 aaKnown RBP eCLIP4.32□□□□□ -1.72
PCM1-220ENST00000523896 FOXL2P58012 376 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 TAS2R50P59544 299 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 ACTR2P61160 394 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 CNGA3Q16281 694 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 FCRLBQ6BAA4 426 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 VSTM1Q6UX27 236 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 SERPINA13PQ6UXR4 307 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 KYAT3Q6YP21 454 aaKnown RBP4.32□□□□□ -1.72
PCM1-220ENST00000523896 HERC6Q8IVU3 1022 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 LAS2Q8IYD9 372 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 GALNT4Q8N4A0 578 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 ADAMTS18Q8TE60 1221 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 AFG1LQ8WV93 481 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 AKAP1Q92667 903 aaKnown RBP eCLIP4.32□□□□□ -1.72
PCM1-220ENST00000523896 RILPL2Q969X0 211 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 ZSCAN31Q96LW9 406 aaPredicted RBP4.32□□□□□ -1.72
PCM1-220ENST00000523896 CCDC17Q96LX7 622 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 PYM1Q9BRP8 204 aaKnown RBP4.32□□□□□ -1.72
PCM1-220ENST00000523896 ELOVL1Q9BW60 279 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 RAB21Q9UL25 225 aa4.32□□□□□ -1.72
PCM1-220ENST00000523896 TRPC5Q9UL62 973 aaPredicted RBP4.32□□□□□ -1.72
PCM1-220ENST00000523896 TTC34A8MYJ7 566 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 ALDOAP04075 364 aaKnown RBP4.31□□□□□ -1.72
PCM1-220ENST00000523896 SLC3A2P08195 630 aaKnown RBP4.31□□□□□ -1.72
PCM1-220ENST00000523896 CYP21A2P08686 494 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 IGFBP2P18065 325 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 SFPQP23246 707 aaKnown RBP eCLIP4.31□□□□□ -1.72
PCM1-220ENST00000523896 SLC8A1P32418 973 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 PAPOLAP51003 745 aaKnown RBP4.31□□□□□ -1.72
PCM1-220ENST00000523896 RNASELQ05823 741 aaKnown RBP4.31□□□□□ -1.72
PCM1-220ENST00000523896 SLC10A2Q12908 348 aaPredicted RBP4.31□□□□□ -1.72
PCM1-220ENST00000523896 GAB1Q13480 694 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 DCTN1Q14203 1278 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 EZH2Q15910 746 aaKnown RBP4.31□□□□□ -1.72
PCM1-220ENST00000523896 SRSF7Q16629 238 aaKnown RBP eCLIP4.31□□□□□ -1.72
PCM1-220ENST00000523896 PROSER3Q2NL68 480 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 ANKRD45Q5TZF3 282 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 ANKS1BQ7Z6G8 1248 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 C2CD5Q86YS7 1000 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 ASB12Q8WXK4 309 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 RITA1Q96K30 269 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 UBXN10Q96LJ8 280 aa4.31□□□□□ -1.72
PCM1-220ENST00000523896 NPAS1Q99742 590 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms