RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 TICAM1Q8IUC6 712 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 SLC41A1Q8IVJ1 513 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 LRRC43Q8N309 656 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 CNTD1Q8N815 330 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 PANK1Q8TE04 598 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 NSUN6Q8TEA1 469 aaKnown RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 CHURC1Q8WUH1 139 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 CCT6BQ92526 530 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 N4BP2L2Q92802 583 aaPredicted RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 DNASE1L2Q92874 299 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 MED8Q96G25 268 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 CRB3Q9BUF7 120 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 NAA15Q9BXJ9 866 aaKnown RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 CRNKL1Q9BZJ0 848 aaKnown RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 PUS7LQ9H0K6 701 aaKnown RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 ELAC1Q9H777 363 aaKnown RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 ATP6V0A4Q9HBG4 840 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 ATP8A2Q9NTI2 1148 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 COMMD8Q9NX08 183 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 IMPACTQ9P2X3 320 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 TPCN1Q9ULQ1 816 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 NOC2LQ9Y3T9 749 aaKnown RBP5.56□□□□□ -1.52
PABPC1-223ENST00000523636 PCDHA2Q9Y5H9 948 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 TRPV2Q9Y5S1 764 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 PIAS3Q9Y6X2 628 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 X6R8D5 127 aa5.56□□□□□ -1.52
PABPC1-223ENST00000523636 RP1L1Q8IWN7 2480 aaPredicted RBP5.55□□□□□ -1.52
PABPC1-223ENST00000523636 KDM3AQ9Y4C1 1321 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 A0A1W2PQ27 194 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 A0A1W2PQ64 194 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 A0A1W2PQC6 194 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 A0A1W2PQD8 194 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 CBFA2T3O75081 653 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 TIPRLO75663 272 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 GJB3O75712 270 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 DNAJC8O75937 253 aaPredicted RBP5.55□□□□□ -1.52
PABPC1-223ENST00000523636 FBXO21O94952 628 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 NPTXRO95502 500 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 CRTAMO95727 393 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 AFPP02771 609 aaKnown RBP5.55□□□□□ -1.52
PABPC1-223ENST00000523636 C8AP07357 584 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 PF4V1P10720 104 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 GNAT1P11488 350 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 MTHFD1P11586 935 aaKnown RBP5.55□□□□□ -1.52
PABPC1-223ENST00000523636 PNLIPP16233 465 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 BCKDHBP21953 392 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 RPS6KB1P23443 525 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 CCNE1P24864 410 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 RDXP35241 583 aaKnown RBP5.55□□□□□ -1.52
PABPC1-223ENST00000523636 IGFALSP35858 605 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 SLC16A2P36021 539 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 NAP1L1P55209 391 aaKnown RBP5.55□□□□□ -1.52
PABPC1-223ENST00000523636 GUCY1A3Q02108 690 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 MVKQ03426 396 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 EXOSC9Q06265 439 aaKnown RBP5.55□□□□□ -1.52
PABPC1-223ENST00000523636 PAK1Q13153 545 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 TTC39AQ5SRH9 613 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 TAF3Q5VWG9 929 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 CTR9Q6PD62 1173 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 LILRA6Q6PI73 481 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 TAS1R1Q7RTX1 841 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 ARHGAP45Q92619 1136 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 TMEM169Q96HH4 297 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 BARD1Q99728 777 aaKnown RBP5.55□□□□□ -1.52
PABPC1-223ENST00000523636 ARMT1Q9H993 441 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 PLEKHA5Q9HAU0 1116 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 ZNF334Q9HCZ1 680 aaPredicted RBP5.55□□□□□ -1.52
PABPC1-223ENST00000523636 PDRG1Q9NUG6 133 aa5.55□□□□□ -1.52
PABPC1-223ENST00000523636 MAP1AP78559 2803 aaPredicted RBP5.55□□□□□ -1.52
PABPC1-223ENST00000523636 PLXND1Q9Y4D7 1925 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 ZMYM6O95789 1325 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 TCRBV16S1A1N1A0A5B0 115 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 PSPNO60542 156 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 ECI2O75521 394 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 EFEMP2O95967 443 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 PYGLP06737 847 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 GALTP07902 379 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 HSD3B1P14060 373 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 PDE6AP16499 860 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 PRKCAP17252 672 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 SDSP20132 328 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 LPOP22079 712 aaPredicted RBP5.54□□□□□ -1.52
PABPC1-223ENST00000523636 XPAP23025 273 aaPredicted RBP5.54□□□□□ -1.52
PABPC1-223ENST00000523636 GRK2P25098 689 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 GRK3P35626 688 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 CHKAP35790 457 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 ARL4AP40617 200 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 BCL6P41182 706 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 GRK6P43250 576 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 CD151P48509 253 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 UBASH3AP57075 661 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 TMPRSS15P98073 1019 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 CYP4F8P98187 520 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 RHDQ02161 417 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 SLC20A2Q08357 652 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 PLCB4Q15147 1175 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 STXBP2Q15833 593 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 MROH9Q5TGP6 573 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 RETSATQ6NUM9 610 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 FGD2Q7Z6J4 655 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms