RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 EID2BQ96D98 161 aa6.79□□□□□ -1.32
CPNE3-206ENST00000523469 PAAF1Q9BRP4 392 aa6.79□□□□□ -1.32
CPNE3-206ENST00000523469 TP63Q9H3D4 680 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-206ENST00000523469 CDC42BPBQ9Y5S2 1711 aa6.79□□□□□ -1.32
CPNE3-206ENST00000523469 SPATA31A1Q5TZJ5 1347 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 FAM135BQ49AJ0 1406 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 GXYLT2A0PJZ3 443 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 WIPF3A6NGB9 483 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 FYB1O15117 783 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 MBPP02686 304 aaPredicted RBP6.78□□□□□ -1.32
CPNE3-206ENST00000523469 CSTBP04080 98 aaKnown RBP6.78□□□□□ -1.32
CPNE3-206ENST00000523469 ATF7P17544 494 aaPredicted RBP6.78□□□□□ -1.32
CPNE3-206ENST00000523469 MATN1P21941 496 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 SERPINF1P36955 418 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 IGHMBP2P38935 993 aaKnown RBP6.78□□□□□ -1.32
CPNE3-206ENST00000523469 JAK3P52333 1124 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 TRIM14Q14142 442 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 GRM4Q14833 912 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 ELF2Q15723 593 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 KRT27Q7Z3Y8 459 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 ATG16L2Q8NAA4 619 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 RSC1A1Q92681 617 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 HIC2Q96JB3 615 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 RMDN3Q96TC7 470 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 ARPC5LQ9BPX5 153 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 ADGRE3Q9BY15 652 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 FBXO28Q9NVF7 368 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 SEMA5BQ9P283 1151 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 PCDHB2Q9Y5E7 798 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 LRP5O75197 1615 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.78□□□□□ -1.32
CPNE3-206ENST00000523469 JCADQ9P266 1359 aa6.78□□□□□ -1.32
CPNE3-206ENST00000523469 FAM135AQ9P2D6 1515 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 TMEM232C9JQI7 657 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 DNPH1O43598 174 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 TNFRSF6BO95407 300 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 DUSP1P28562 367 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 POLE2P56282 527 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 RAE1P78406 368 aaKnown RBP6.77□□□□□ -1.33
CPNE3-206ENST00000523469 CCDC38Q502W7 563 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 RINT1Q6NUQ1 792 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 ACSM6Q6P461 480 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 ZNF782Q6ZMW2 699 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-206ENST00000523469 OR52L2PQ8NGH6 319 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 NTN5Q8WTR8 489 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-206ENST00000523469 DPF1Q92782 380 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 KATNAL1Q9BW62 490 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 RNF26Q9BY78 433 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-206ENST00000523469 MAFFQ9ULX9 164 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 NFU1Q9UMS0 254 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 UBE2J1Q9Y385 318 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-206ENST00000523469 MED14O60244 1454 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 LRRC9Q6ZRR7 1453 aa6.77□□□□□ -1.33
CPNE3-206ENST00000523469 ZC3H13Q5T200 1668 aaKnown RBP6.77□□□□□ -1.33
CPNE3-206ENST00000523469 LRP6O75581 1613 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 CCDC187A0A096LP49 1063 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-206ENST00000523469 LATS1O95835 1130 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 ITGA2BP08514 1039 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 CYP2A6P11509 494 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-206ENST00000523469 ALADP13716 330 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 KLRK1P26718 216 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 CBFBQ13951 182 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 FAM83BQ5T0W9 1011 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 DPY19L2P1Q6NXN4 242 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 SLC22A17Q8WUG5 538 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 GLMPQ8WWB7 406 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 KCNK9Q9NPC2 374 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 ABHD10Q9NUJ1 306 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 DACT1Q9NYF0 836 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 LRFN1Q9P244 771 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 VPS4AQ9UN37 437 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 SCAF8Q9UPN6 1271 aaKnown RBP6.76□□□□□ -1.33
CPNE3-206ENST00000523469 TNRQ92752 1358 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 UGGT1Q9NYU2 1555 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 PREX2Q70Z35 1606 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 RGS12O14924 1447 aa6.76□□□□□ -1.33
CPNE3-206ENST00000523469 SHPRHQ149N8 1683 aa6.75□□□□□ -1.33
CPNE3-206ENST00000523469 ACKR2O00590 384 aa6.75□□□□□ -1.33
CPNE3-206ENST00000523469 FCHO1O14526 889 aa6.75□□□□□ -1.33
CPNE3-206ENST00000523469 CER1O95813 267 aa6.75□□□□□ -1.33
CPNE3-206ENST00000523469 FBLP22087 321 aaKnown RBP6.75□□□□□ -1.33
CPNE3-206ENST00000523469 WDR5P61964 334 aaKnown RBP6.75□□□□□ -1.33
CPNE3-206ENST00000523469 RANBP10Q6VN20 620 aa6.75□□□□□ -1.33
CPNE3-206ENST00000523469 TRABD2AQ86V40 505 aa6.75□□□□□ -1.33
CPNE3-206ENST00000523469 CACNA2D3Q8IZS8 1091 aa6.75□□□□□ -1.33
CPNE3-206ENST00000523469 C8orf58Q8NAV2 365 aa6.75□□□□□ -1.33
CPNE3-206ENST00000523469 PNISRQ8TF01 805 aaKnown RBP6.75□□□□□ -1.33
CPNE3-206ENST00000523469 LTV1Q96GA3 475 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-206ENST00000523469 SEMA4CQ9C0C4 833 aa6.75□□□□□ -1.33
CPNE3-206ENST00000523469 FLRT1Q9NZU1 646 aa6.75□□□□□ -1.33
CPNE3-206ENST00000523469 HERC5Q9UII4 1024 aaKnown RBP6.75□□□□□ -1.33
CPNE3-206ENST00000523469 TTC34A8MYJ7 566 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 M0QZQ0 153 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 CERS1P27544 350 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 AKT1P31749 480 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 TRAPPC10P48553 1259 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 FOXO1Q12778 655 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 CNGA3Q16281 694 aa6.74□□□□□ -1.33
CPNE3-206ENST00000523469 PDCD2Q16342 344 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms