RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 CXCR3P49682 368 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 TAS2R40P59535 323 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 COG7P83436 770 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 FCHO2Q0JRZ9 810 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 ZC3H12AQ5D1E8 599 aaKnown RBP12.38□□□□□ -0.43
PVT1-215ENST00000522963 SCYL2Q6P3W7 929 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 BMP8AQ7Z5Y6 402 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 FAM131BQ86XD5 332 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 DNASE1L2Q92874 299 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 PEBP4Q96S96 227 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 ANLNQ9NQW6 1124 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 DUS2Q9NX74 493 aaKnown RBP12.38□□□□□ -0.43
PVT1-215ENST00000522963 CFAP97Q9P2B7 532 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 PCSK1NQ9UHG2 260 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 NDRG2Q9UN36 371 aaKnown RBP12.38□□□□□ -0.43
PVT1-215ENST00000522963 ARHGAP26Q9UNA1 814 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 PIAS3Q9Y6X2 628 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 ATG2BQ96BY7 2078 aa12.38□□□□□ -0.43
PVT1-215ENST00000522963 MIA3Q5JRA6 1907 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 I6L893 689 aaPredicted RBP12.37□□□□□ -0.43
PVT1-215ENST00000522963 PI15O43692 258 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 SPOPO43791 374 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 GREM1O60565 184 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 STC2O76061 302 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 FTCDO95954 541 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 ARSAP15289 507 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 COL9A1P20849 921 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 IL1R2P27930 398 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 AVPR2P30518 371 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 CCR1P32246 355 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 SLC1A1P43005 524 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 SSR1P43307 286 aaKnown RBP12.37□□□□□ -0.43
PVT1-215ENST00000522963 SLC25A11Q02978 314 aaKnown RBP12.37□□□□□ -0.43
PVT1-215ENST00000522963 PRKCQQ04759 706 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 RING1Q06587 406 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 USP4Q13107 963 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 ZNF77Q15935 545 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 CWF19L1Q69YN2 538 aaKnown RBP12.37□□□□□ -0.43
PVT1-215ENST00000522963 ASTLQ6HA08 431 aaPredicted RBP12.37□□□□□ -0.43
PVT1-215ENST00000522963 CYP4V2Q6ZWL3 525 aaPredicted RBP12.37□□□□□ -0.43
PVT1-215ENST00000522963 SND1Q7KZF4 910 aaKnown RBP eCLIP12.37□□□□□ -0.43
PVT1-215ENST00000522963 ZSCAN30Q86W11 494 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 SYCE1Q8N0S2 351 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 CCDC185Q8N715 623 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 RNF34Q969K3 372 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 PLD4Q96BZ4 506 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 NCAPGQ9BPX3 1015 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 LINC00597Q9H2U6 94 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 TMPRSS4Q9NRS4 437 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 ARHGEF38Q9NXL2 777 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 USP18Q9UMW8 372 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 SH3BP1Q9Y3L3 701 aa12.37□□□□□ -0.43
PVT1-215ENST00000522963 KANSL1LA0AUZ9 987 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 FAM170BA6NMN3 283 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 KCNU1A8MYU2 1149 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 PRPSAP2O60256 369 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 KIF5CO60282 957 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 KLKB1P03952 638 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 DCNP07585 359 aaKnown RBP12.36□□□□□ -0.43
PVT1-215ENST00000522963 STARD6P59095 220 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 RUNX3Q13761 415 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 PPP2R5DQ14738 602 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 ITPRIPL2Q3MIP1 535 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 ZNF569Q5MCW4 686 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 BRMS1LQ5PSV4 323 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 TXNRD3NBQ6F5E7 133 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 ZNF852Q6ZMS4 543 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 NT5DC3Q86UY8 548 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 SLC35F6Q8N357 371 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 TMEM105Q8N8V8 129 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 TRIM58Q8NG06 486 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 OSCP1Q8WVF1 389 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 FAM3CQ92520 227 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 CD101Q93033 1021 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 NTAN1Q96AB6 310 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 ALS2CR12Q96Q35 445 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 TKTL2Q9H0I9 626 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 WDCPQ9H6R7 721 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 ZWILCHQ9H900 591 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 HPS4Q9NQG7 708 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 TMEM51Q9NW97 253 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.36□□□□□ -0.43
PVT1-215ENST00000522963 XPO7Q9UIA9 1087 aaKnown RBP12.36□□□□□ -0.43
PVT1-215ENST00000522963 SIT1Q9Y3P8 196 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 HCN4Q9Y3Q4 1203 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 MTF2Q9Y483 593 aaPredicted RBP12.36□□□□□ -0.43
PVT1-215ENST00000522963 ZNF318Q5VUA4 2279 aa12.36□□□□□ -0.43
PVT1-215ENST00000522963 SPECC1L-ADORA2AF8WAN1 911 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 ARNTLO00327 626 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 MAN2B1O00754 1011 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 MOCS2O96007 188 aaPredicted RBP12.35□□□□□ -0.43
PVT1-215ENST00000522963 APOEP02649 317 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 SLC2A3P11169 496 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 TNNT1P13805 278 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 TCF3P15923 654 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 AOC1P19801 751 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 CORO1AP31146 461 aaKnown RBP12.35□□□□□ -0.43
PVT1-215ENST00000522963 ADRA1BP35368 520 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 GJC1P36383 396 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 CLCN5P51795 746 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms