RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 CYB5D2Q8WUJ1 264 aa19.42■□□□□ 0.7
SPIDR-220ENST00000522900 PPP1R13BQ96KQ4 1090 aa19.42■□□□□ 0.7
SPIDR-220ENST00000522900 PRICKLE1Q96MT3 831 aaPredicted RBP19.42■□□□□ 0.7
SPIDR-220ENST00000522900 SERPINB11Q96P15 392 aa19.42■□□□□ 0.7
SPIDR-220ENST00000522900 MKRN2Q9H000 416 aaKnown RBP19.42■□□□□ 0.7
SPIDR-220ENST00000522900 POPDC2Q9HBU9 364 aa19.42■□□□□ 0.7
SPIDR-220ENST00000522900 PLCB1Q9NQ66 1216 aa19.42■□□□□ 0.7
SPIDR-220ENST00000522900 GGA2Q9UJY4 613 aa19.42■□□□□ 0.7
SPIDR-220ENST00000522900 PCDHGC3Q9UN70 934 aa19.42■□□□□ 0.7
SPIDR-220ENST00000522900 NFE2L3Q9Y4A8 694 aa19.42■□□□□ 0.7
SPIDR-220ENST00000522900 RALGAPA1Q6GYQ0 2036 aa19.42■□□□□ 0.7
SPIDR-220ENST00000522900 PES1O00541 588 aaKnown RBP19.41■□□□□ 0.7
SPIDR-220ENST00000522900 NPC1O15118 1278 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 TIMM44O43615 452 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 MOCS2O96007 188 aaPredicted RBP19.41■□□□□ 0.7
SPIDR-220ENST00000522900 ITPKAP23677 461 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 CD70P32970 193 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 RPS24P62847 133 aaKnown RBP19.41■□□□□ 0.7
SPIDR-220ENST00000522900 RPL6Q02878 288 aaKnown RBP19.41■□□□□ 0.7
SPIDR-220ENST00000522900 DRAP1Q14919 205 aaPredicted RBP19.41■□□□□ 0.7
SPIDR-220ENST00000522900 EIF4HQ15056 248 aaKnown RBP19.41■□□□□ 0.7
SPIDR-220ENST00000522900 ZC3H12AQ5D1E8 599 aaKnown RBP19.41■□□□□ 0.7
SPIDR-220ENST00000522900 TCP11X2Q5H9J9 407 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 MPP7Q5T2T1 576 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 KLHDC7AQ5VTJ3 777 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 RNF43Q68DV7 783 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 FAM71AQ8IYT1 594 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 C1orf131Q8NDD1 294 aaKnown RBP19.41■□□□□ 0.7
SPIDR-220ENST00000522900 LMLNQ96KR4 655 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 NUCKS1Q9H1E3 243 aaKnown RBP19.41■□□□□ 0.7
SPIDR-220ENST00000522900 LHX5Q9H2C1 402 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 TAB2Q9NYJ8 693 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 FHOD1Q9Y613 1164 aa19.41■□□□□ 0.7
SPIDR-220ENST00000522900 ATXN2Q99700 1313 aaKnown RBP19.41■□□□□ 0.7
SPIDR-220ENST00000522900 LNP1A1A4G5 178 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 KHNYNO15037 678 aaKnown RBP19.4■□□□□ 0.7
SPIDR-220ENST00000522900 IRAK2O43187 625 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 AP5Z1O43299 807 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 SYNCRIPO60506 623 aaKnown RBP19.4■□□□□ 0.7
SPIDR-220ENST00000522900 ZNF217O75362 1048 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 GRAP2O75791 330 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 TRUB2O95900 331 aaKnown RBP19.4■□□□□ 0.7
SPIDR-220ENST00000522900 IGLV3-25P01717 112 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 ERBB2P04626 1255 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 EPHX1P07099 455 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 PABPC1P11940 636 aaKnown RBP19.4■□□□□ 0.7
SPIDR-220ENST00000522900 HLA-EP13747 358 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 NNTQ13423 1086 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 EIF4EBP2Q13542 120 aaPredicted RBP19.4■□□□□ 0.7
SPIDR-220ENST00000522900 STARD3Q14849 445 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 CT47A1Q5JQC4 288 aaPredicted RBP19.4■□□□□ 0.7
SPIDR-220ENST00000522900 PPM1JQ5JR12 505 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 SPDYCQ5MJ68 293 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 LYSMD4Q5XG99 296 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 SLC36A4Q6YBV0 504 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 SLC41A1Q8IVJ1 513 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 DEFB106AQ8N104 65 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 CFAP52Q8N1V2 620 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.4■□□□□ 0.7
SPIDR-220ENST00000522900 EDEM2Q9BV94 578 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 PRDM16Q9HAZ2 1276 aa19.4■□□□□ 0.7
SPIDR-220ENST00000522900 THADAQ6YHU6 1953 aa19.39■□□□□ 0.7
SPIDR-220ENST00000522900 FAM170AA1A519 330 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 KRT9P35527 623 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 COPAP53621 1224 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 ARID5AQ03989 594 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 ZNF33AQ06730 810 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 RAPGEF1Q13905 1077 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 PTPRNQ16849 979 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 DCAF6Q58WW2 860 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 MS4A13Q5J8X5 152 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 MBLAC2Q68D91 279 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 IL31Q6EBC2 164 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 SERPINA13PQ6UXR4 307 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 RBM43Q6ZSC3 357 aaKnown RBP19.39■□□□□ 0.69
SPIDR-220ENST00000522900 FAM183BPQ6ZVS7 135 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 TMPRSS6Q8IU80 811 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 SYT12Q8IV01 421 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 ZNF366Q8N895 744 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 ENOX1Q8TC92 643 aaKnown RBP19.39■□□□□ 0.69
SPIDR-220ENST00000522900 WFIKKN2Q8TEU8 576 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 SLC2A13Q96QE2 648 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 TRIM62Q9BVG3 475 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 LSM14BQ9BX40 385 aaKnown RBP19.39■□□□□ 0.69
SPIDR-220ENST00000522900 NAA15Q9BXJ9 866 aaKnown RBP19.39■□□□□ 0.69
SPIDR-220ENST00000522900 TMEM245Q9H330 911 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 ITM2CQ9NQX7 267 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 PILRBQ9UKJ0 227 aa19.39■□□□□ 0.69
SPIDR-220ENST00000522900 C4orf47A7E2U8 309 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 CDX4O14627 284 aaPredicted RBP19.38■□□□□ 0.69
SPIDR-220ENST00000522900 PTPN20Q4JDL3 420 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 TRIM61Q5EBN2 209 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 FSCBQ5H9T9 825 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 RAP1GAP2Q684P5 730 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 OR6B2Q6IFH4 312 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 MMS22LQ6ZRQ5 1243 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 MFN1Q8IWA4 741 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 LGI2Q8N0V4 545 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 AHI1Q8N157 1196 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 CARNMT1Q8N4J0 409 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms