RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 GPR179Q6PRD1 2367 aa18.54■□□□□ 0.56
CLK4-211ENST00000522556 WASH3PC4AMC7 463 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 M0QYT0 321 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 TBL1XO60907 577 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 CYBBP04839 570 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 SLC11A2P49281 568 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 NUMBP49757 651 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 SULT1E1P49888 294 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 PPP2R5DQ14738 602 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 CRY1Q16526 586 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 RNF43Q68DV7 783 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 ZC3H14Q6PJT7 736 aaKnown RBP18.53■□□□□ 0.56
CLK4-211ENST00000522556 CIR1Q86X95 450 aaPredicted RBP18.53■□□□□ 0.56
CLK4-211ENST00000522556 RNF214Q8ND24 703 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 JOSD2Q8TAC2 188 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 TMA16Q96EY4 203 aaKnown RBP18.53■□□□□ 0.56
CLK4-211ENST00000522556 AGPAT1Q99943 283 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 TRIM62Q9BVG3 475 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 TPSD1Q9BZJ3 242 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 SEPT11Q9NVA2 429 aaKnown RBP18.53■□□□□ 0.56
CLK4-211ENST00000522556 CACNA2D2Q9NY47 1150 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 TAS2R14Q9NYV8 317 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 TMEM59LQ9UK28 342 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 SLC27A6Q9Y2P4 619 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 SNX10Q9Y5X0 201 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 RAD54BQ9Y620 910 aa18.53■□□□□ 0.56
CLK4-211ENST00000522556 KCNU1A8MYU2 1149 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 GOLGA6L19H0YKK7 550 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 APOEP02649 317 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 HOXA6P31267 233 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 NOS2P35228 1153 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 MATKP42679 507 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 UBASH3AP57075 661 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 CENPCQ03188 943 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 MS4A13Q5J8X5 152 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 ANO7Q6IWH7 933 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 KIAA1211LQ6NV74 962 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 WDR5BQ86VZ2 330 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 LONP2Q86WA8 852 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 CHSY1Q86X52 802 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 ZDHHC17Q8IUH5 632 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 LGI2Q8N0V4 545 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 MDGA1Q8NFP4 955 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 CFAP57Q96MR6 1250 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 PRMT1Q99873 361 aaKnown RBP18.52■□□□□ 0.56
CLK4-211ENST00000522556 FAM126AQ9BYI3 521 aaPredicted RBP18.52■□□□□ 0.56
CLK4-211ENST00000522556 TSPY26PQ9H489 355 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 ABCB8Q9NUT2 735 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.52■□□□□ 0.56
CLK4-211ENST00000522556 INVSQ9Y283 1065 aa18.52■□□□□ 0.56
CLK4-211ENST00000522556 ZFHX2Q9C0A1 2572 aaPredicted RBP18.52■□□□□ 0.56
CLK4-211ENST00000522556 DCLK1O15075 740 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 ADCY5O95622 1261 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 APBB3O95704 486 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 FERP16591 822 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 TACR2P21452 398 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 CD70P32970 193 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 SCNN1AP37088 669 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 FSCBQ5H9T9 825 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 SH3PXD2AQ5TCZ1 1133 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 LRSAM1Q6UWE0 723 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 TRIM72Q6ZMU5 477 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 MON1BQ7L1V2 547 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 ANKS1BQ7Z6G8 1248 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 DCLK2Q8N568 766 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 TSTD1Q8NFU3 115 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 NT5C3BQ969T7 300 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 AZIN2Q96A70 460 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 EPC1Q9H2F5 836 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 CD248Q9HCU0 757 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 SMG5Q9UPR3 1016 aaKnown RBP18.51■□□□□ 0.55
CLK4-211ENST00000522556 STARD13Q9Y3M8 1113 aa18.51■□□□□ 0.55
CLK4-211ENST00000522556 A0A1W2PQF6 199 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 LMNAP02545 664 aaKnown RBP18.5■□□□□ 0.55
CLK4-211ENST00000522556 SKILP12757 684 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 HOXB2P14652 356 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 NRLP54845 237 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 TPM4P67936 248 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 ASIC2Q16515 512 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 FUT11Q495W5 492 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 PRR23BQ6ZRT6 265 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 C14orf80Q86SX3 495 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 HJURPQ8NCD3 748 aaPredicted RBP18.5■□□□□ 0.55
CLK4-211ENST00000522556 CYB5D2Q8WUJ1 264 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 LMLNQ96KR4 655 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 BTN2A3PQ96KV6 586 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 XPO4Q9C0E2 1151 aaKnown RBP18.5■□□□□ 0.55
CLK4-211ENST00000522556 SLC6A17Q9H1V8 727 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 CKAP5Q14008 2032 aa18.5■□□□□ 0.55
CLK4-211ENST00000522556 OTOGLQ3ZCN5 2332 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 TCRBV5S1A1TA0A578 114 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 TCRBV21S2A2A0A5A6 115 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 AXIN1O15169 862 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 PAGE1O75459 146 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 CAVIN2O95810 425 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 PRKCHP24723 683 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 CCR1P32246 355 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 IL12RB1P42701 662 aa18.49■□□□□ 0.55
CLK4-211ENST00000522556 NSFP46459 744 aaKnown RBP18.49■□□□□ 0.55
CLK4-211ENST00000522556 SNX16P57768 344 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms