RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, human

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF2-204	ENST00000522539	ZC3H3	Q8IXZ2	948 aa	Known RBP	12.85	□□□□□ -0.35
BRF2-204	ENST00000522539	ENGASE	Q8NFI3	743 aa		12.85	□□□□□ -0.35
BRF2-204	ENST00000522539	SNX19	Q92543	992 aa		12.85	□□□□□ -0.35
BRF2-204	ENST00000522539	ZNF396	Q96N95	335 aa	Predicted RBP	12.85	□□□□□ -0.35
BRF2-204	ENST00000522539	IMPG2	Q9BZV3	1241 aa		12.85	□□□□□ -0.35
BRF2-204	ENST00000522539	PRSS16	Q9NQE7	514 aa		12.85	□□□□□ -0.35
BRF2-204	ENST00000522539	STRIP2	Q9ULQ0	834 aa		12.85	□□□□□ -0.35
BRF2-204	ENST00000522539		A0A1B0GTQ1	180 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	SLC12A8	A0AV02	714 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	EIF4E1B	A6NMX2	242 aa	Known RBP	12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	GOLGA8CP	A6NN73	597 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	KCNK3	O14649	394 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	VILL	O15195	856 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	ACTN4	O43707	911 aa	Known RBP	12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	KALRN	O60229	2985 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	C1QL1	O75973	258 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	LATS1	O95835	1130 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	SLFN14	P0C7P3	912 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	CD58	P19256	250 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	ABCG1	P45844	678 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	VAMP7	P51809	220 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	YWHAG	P61981	247 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	RACK1	P63244	317 aa	Known RBP	12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	ARHGAP17	Q68EM7	881 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	CHST9	Q7L1S5	443 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	GRAMD1C	Q8IYS0	662 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	CYB5D2	Q8WUJ1	264 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	ARID3A	Q99856	593 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	PRORY	Q9H606	182 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	PCDHA7	Q9UN72	937 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	PLA2G4C	Q9UP65	541 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	FRMD4B	Q9Y2L6	1034 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	HBS1L	Q9Y450	684 aa	Known RBP	12.84	□□□□□ -0.35
BRF2-204	ENST00000522539	PTPRQ	Q9UMZ3	2332 aa		12.84	□□□□□ -0.35
BRF2-204	ENST00000522539		A0A1W2PPC4	97 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	PLK4	O00444	970 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	DLD	P09622	509 aa	Known RBP	12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	C1S	P09871	688 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	CDK4	P11802	303 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	EIF2S3	P41091	472 aa	Known RBP	12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	GCLM	P48507	274 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	HARS2	P49590	506 aa	Known RBP	12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	BCAT1	P54687	386 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	RAD23B	P54727	409 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	ARID5A	Q03989	594 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	SHB	Q15464	509 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	INAVA	Q3KP66	663 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	KMT5B	Q4FZB7	885 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	FNDC3B	Q53EP0	1204 aa	Known RBP	12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	CEP135	Q66GS9	1140 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	USP30	Q70CQ3	517 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	INTS8	Q75QN2	995 aa	Known RBP	12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	RSRC2	Q7L4I2	434 aa	Known RBP	12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	FMNL3	Q8IVF7	1028 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	AHI1	Q8N157	1196 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	TTC39C	Q8N584	583 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	ZNF366	Q8N895	744 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	ANKRD52	Q8NB46	1076 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	SLC4A11	Q8NBS3	891 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	LSM14A	Q8ND56	463 aa	Known RBP	12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	GOLGA1	Q92805	767 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	MYO19	Q96H55	970 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	LMLN	Q96KR4	655 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	HEXIM2	Q96MH2	286 aa	Known RBP	12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	IRX2	Q9BZI1	471 aa	Predicted RBP	12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	DNAI2	Q9GZS0	605 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	RSPH9	Q9H1X1	276 aa	Predicted RBP	12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	OLA1	Q9NTK5	396 aa	Known RBP	12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	ABCB8	Q9NUT2	735 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	EXOC1	Q9NV70	894 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	FTSJ1	Q9UET6	329 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	GGA2	Q9UJY4	613 aa		12.83	□□□□□ -0.36
BRF2-204	ENST00000522539	ATXN7	O15265	892 aa	Predicted RBP	12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	FSBP	O95073	299 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	KIF20A	O95235	890 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	ZBED1	O96006	694 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	DNTT	P04053	509 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	WNT1	P04628	370 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	TRIM49	P0CI25	452 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	TRIM49C	P0CI26	452 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	PABPC1	P11940	636 aa	Known RBP	12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	ITPKB	P27987	946 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	GTF2H1	P32780	548 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	TKTL1	P51854	596 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	PKP1	Q13835	747 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	ARID5B	Q14865	1188 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	RTP5	Q14D33	572 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	TTC31	Q49AM3	519 aa	Predicted RBP	12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	ZNF394	Q53GI3	561 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	MPP7	Q5T2T1	576 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	ADGRF1	Q5T601	910 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	MBLAC2	Q68D91	279 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	ZNF776	Q68DI1	518 aa	Predicted RBP	12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	KIAA0895L	Q68EN5	471 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	WFDC5	Q8TCV5	224 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	SAP25	Q8TEE9	199 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	TSC1	Q92574	1164 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	COL26A1	Q96A83	441 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	NXPE2	Q96DL1	559 aa		12.82	□□□□□ -0.36
BRF2-204	ENST00000522539	TMA16	Q96EY4	203 aa	Known RBP	12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms