RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 KLF16Q9BXK1 252 aaPredicted RBP13.53□□□□□ -0.24
CPNE3-205ENST00000522240 ATXN3LQ9H3M9 355 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 PRDM12Q9H4Q4 367 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 TRPC7Q9HCX4 862 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 SLC12A6Q9UHW9 1150 aa13.53□□□□□ -0.24
CPNE3-205ENST00000522240 TRAV19A0A0A6YYK7 116 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 GOLGA6L10A0A0M3HER8 536 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 H3BRJ5 948 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 I6L893 689 aaPredicted RBP13.52□□□□□ -0.25
CPNE3-205ENST00000522240 PDE2AO00408 941 aaPredicted RBP13.52□□□□□ -0.25
CPNE3-205ENST00000522240 MOSPD3O75425 235 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 TJP3O95049 919 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 SLU7O95391 586 aaKnown RBP13.52□□□□□ -0.25
CPNE3-205ENST00000522240 CD48P09326 243 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 MBL2P11226 248 aaPredicted RBP13.52□□□□□ -0.25
CPNE3-205ENST00000522240 HOXB8P17481 243 aaPredicted RBP13.52□□□□□ -0.25
CPNE3-205ENST00000522240 HOXC13P31276 330 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 GTF2F1P35269 517 aaKnown RBP eCLIP13.52□□□□□ -0.25
CPNE3-205ENST00000522240 ARL4AP40617 200 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 CCR2P41597 374 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 TFDP2Q14188 446 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 LONRF2Q1L5Z9 754 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 ANKRD54Q6NXT1 300 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 AADACL2Q6P093 401 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 GRASPQ7Z6J2 395 aaPredicted RBP13.52□□□□□ -0.25
CPNE3-205ENST00000522240 AZIN2Q96A70 460 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 ZFRQ96KR1 1074 aaKnown RBP13.52□□□□□ -0.25
CPNE3-205ENST00000522240 CALN1Q9BXU9 219 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 PIDD1Q9HB75 910 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 ANLNQ9NQW6 1124 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 NUP210Q8TEM1 1887 aaPredicted RBP13.52□□□□□ -0.25
CPNE3-205ENST00000522240 C2orf16Q68DN1 1984 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 NOTCH4Q99466 2003 aa13.52□□□□□ -0.25
CPNE3-205ENST00000522240 CTAGE15A4D2H0 777 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 CCDC188H7C350 402 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 PAGE1O75459 146 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 CTAGE8P0CG41 777 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 ZFXP17010 805 aaPredicted RBP13.51□□□□□ -0.25
CPNE3-205ENST00000522240 HDCP19113 662 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 HCAR3P49019 387 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 RBM10P98175 930 aaKnown RBP13.51□□□□□ -0.25
CPNE3-205ENST00000522240 ADAM15Q13444 863 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 COL19A1Q14993 1142 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 SLC5A9Q2M3M2 681 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 PPP6R3Q5H9R7 873 aaPredicted RBP13.51□□□□□ -0.25
CPNE3-205ENST00000522240 MANEALQ5VSG8 457 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 TXNDC8Q6A555 127 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 BBS12Q6ZW61 710 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 ANKS1BQ7Z6G8 1248 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 GPR149Q86SP6 731 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 CTAGE6Q86UF2 777 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 DDX42Q86XP3 938 aaKnown RBP eCLIP13.51□□□□□ -0.25
CPNE3-205ENST00000522240 CTAGE4Q8IX94 777 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 ARL14EPQ8N8R7 260 aaPredicted RBP13.51□□□□□ -0.25
CPNE3-205ENST00000522240 TCEAL4Q96EI5 215 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 C1orf74Q96LT6 269 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 CSPG4P5Q96PW8 444 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 RNF157Q96PX1 679 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 HERPUD2Q9BSE4 406 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 CARD6Q9BX69 1037 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 RNF38Q9H0F5 515 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 IGFLR1Q9H665 355 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 TASP1Q9H6P5 420 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 SMARCAL1Q9NZC9 954 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 ARHGAP26Q9UNA1 814 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 MTCH2Q9Y6C9 303 aa13.51□□□□□ -0.25
CPNE3-205ENST00000522240 EEF2KO00418 725 aaKnown RBP13.5□□□□□ -0.25
CPNE3-205ENST00000522240 KRIT1O00522 736 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 NRG2O14511 850 aaPredicted RBP13.5□□□□□ -0.25
CPNE3-205ENST00000522240 STC2O76061 302 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 MOCS2O96007 188 aaPredicted RBP13.5□□□□□ -0.25
CPNE3-205ENST00000522240 CKMP06732 381 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 TCF3P15923 654 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 IL4RP24394 825 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 WEE1P30291 646 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 HARS2P49590 506 aaKnown RBP13.5□□□□□ -0.25
CPNE3-205ENST00000522240 TPI1P60174 286 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 MMRN1Q13201 1228 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 DPYSQ14117 519 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 SIX1Q15475 284 aaPredicted RBP13.5□□□□□ -0.25
CPNE3-205ENST00000522240 TEAD2Q15562 447 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 CYP1B1Q16678 543 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 CTC1Q2NKJ3 1217 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 ANKRD20A8PQ5CZ79 823 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 RARS2Q5T160 578 aaKnown RBP13.5□□□□□ -0.25
CPNE3-205ENST00000522240 GPR158Q5T848 1215 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 SLC9A4Q6AI14 798 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 TMC5Q6UXY8 1006 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 RFX8Q6ZV50 586 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 RFX6Q8HWS3 928 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 PYROXD2Q8N2H3 581 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 MAB21L3Q8N8X9 362 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 C12orf50Q8NA57 414 aaPredicted RBP13.5□□□□□ -0.25
CPNE3-205ENST00000522240 TTC13Q8NBP0 860 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 SPATA4Q8NEY3 305 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.5□□□□□ -0.25
CPNE3-205ENST00000522240 ATXN2LQ8WWM7 1075 aaKnown RBP13.5□□□□□ -0.25
CPNE3-205ENST00000522240 SLC22A12Q96S37 553 aa13.5□□□□□ -0.25
CPNE3-205ENST00000522240 GAS2L1Q99501 681 aaPredicted RBP13.5□□□□□ -0.25
CPNE3-205ENST00000522240 FRMD8P1Q9BZ68 369 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms