RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 WDR72Q3MJ13 1102 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 MAP9Q49MG5 647 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 ANO7Q6IWH7 933 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 TMCO3Q6UWJ1 677 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 SYT13Q7L8C5 426 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 DPH6Q7L8W6 267 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 SPATA18Q8TC71 538 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 FNIP1Q8TF40 1166 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 PKNOX2Q96KN3 472 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 ZNF560Q96MR9 790 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 ZSWIM1Q9BR11 485 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 GTPBP2Q9BX10 602 aaKnown RBP11.35□□□□□ -0.59
MRPS28-208ENST00000521605 PDCL3Q9H2J4 239 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 ARFGAP3Q9NP61 516 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 HPS4Q9NQG7 708 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.35□□□□□ -0.59
MRPS28-208ENST00000521605 OBP2AQ9NY56 170 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 ADAM22Q9P0K1 906 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 MBD1Q9UIS9 605 aaPredicted RBP11.35□□□□□ -0.59
MRPS28-208ENST00000521605 PCDHA3Q9Y5H8 950 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 THADAQ6YHU6 1953 aa11.35□□□□□ -0.59
MRPS28-208ENST00000521605 ASCC3Q8N3C0 2202 aaKnown RBP11.35□□□□□ -0.59
MRPS28-208ENST00000521605 TCRBV5S1A1TA0A578 114 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 FAM221BA6H8Z2 402 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 TMCO5BA8MYB1 307 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 PIRO00625 290 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 RRP9O43818 475 aaKnown RBP11.34□□□□□ -0.59
MRPS28-208ENST00000521605 PROSCO94903 275 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 VNN2O95498 520 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 CFIP05156 583 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 ARSAP15289 507 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 DRD1P21728 446 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 PEX5P50542 639 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 CDR1P51861 262 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 ATXN3P54252 364 aaPredicted RBP11.34□□□□□ -0.59
MRPS28-208ENST00000521605 RAD23BP54727 409 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 C19orf57Q0VDD7 668 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 SEMA3BQ13214 749 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 LRRC38Q5VT99 294 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 NAA35Q5VZE5 725 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 RAB44Q7Z6P3 723 aaPredicted RBP11.34□□□□□ -0.59
MRPS28-208ENST00000521605 DNAJB7Q7Z6W7 309 aaPredicted RBP11.34□□□□□ -0.59
MRPS28-208ENST00000521605 PIP4P1Q86T03 277 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 C11orf74Q86VG3 221 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 ABCA7Q8IZY2 2146 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 HDDC3Q8N4P3 179 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 NIPA2Q8N8Q9 360 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 TTC16Q8NEE8 873 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 ACDQ96AP0 544 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 C18orf25Q96B23 403 aaPredicted RBP11.34□□□□□ -0.59
MRPS28-208ENST00000521605 CYFIP2Q96F07 1278 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 CRELD1Q96HD1 420 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 TMEM176AQ96HP8 235 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 ZMAT2Q96NC0 199 aaKnown RBP11.34□□□□□ -0.59
MRPS28-208ENST00000521605 RUNDC3BQ96NL0 473 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 P2RY13Q9BPV8 354 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 FAM83CQ9BQN1 747 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 ACP6Q9NPH0 428 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 CYLDQ9NQC7 956 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 TMEM74BQ9NUR3 256 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 SLC38A7Q9NVC3 462 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.34□□□□□ -0.59
MRPS28-208ENST00000521605 MAFFQ9ULX9 164 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 AGAP1Q9UPQ3 857 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 TIMM13Q9Y5L4 95 aaPredicted RBP11.34□□□□□ -0.59
MRPS28-208ENST00000521605 V9GYY5 206 aaPredicted RBP11.34□□□□□ -0.59
MRPS28-208ENST00000521605 TRIP11Q15643 1979 aa11.34□□□□□ -0.59
MRPS28-208ENST00000521605 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 BHMG1C9JSJ3 638 aaPredicted RBP11.33□□□□□ -0.6
MRPS28-208ENST00000521605 MYO1FO00160 1098 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 PSTPIP1O43586 416 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 KRT19P08727 400 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 GABRB2P47870 512 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 SNX16P57768 344 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 MAMLD1Q13495 774 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 ZNF423Q2M1K9 1284 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 PPP1R15BQ5SWA1 713 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 C9orf57Q5W0N0 161 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 LCLAT1Q6UWP7 414 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 TMEFF1Q8IYR6 380 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 TTC9BQ8N6N2 239 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 PNPLA1Q8N8W4 532 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 SLC4A11Q8NBS3 891 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 C3orf20Q8ND61 904 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 APPL2Q8NEU8 664 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 WHAMMQ8TF30 809 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 STK32AQ8WU08 396 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 MAIP1Q8WWC4 291 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 EZH1Q92800 747 aaPredicted RBP11.33□□□□□ -0.6
MRPS28-208ENST00000521605 FAM84AQ96KN4 292 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 CAPZA3Q96KX2 299 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 SUSD3Q96L08 255 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 NT5C1AQ9BXI3 368 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 TASP1Q9H6P5 420 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 FAM53CQ9NYF3 392 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 EVLQ9UI08 416 aaPredicted RBP11.33□□□□□ -0.6
MRPS28-208ENST00000521605 CCL26Q9Y258 94 aa11.33□□□□□ -0.6
MRPS28-208ENST00000521605 CACNA1EQ15878 2313 aa11.32□□□□□ -0.6
MRPS28-208ENST00000521605 TENM4Q6N022 2769 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms