RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 VPS51Q9UID3 782 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 SCAF8Q9UPN6 1271 aaKnown RBP4.62□□□□□ -1.67
SQLE-204ENST00000520493 DRG1Q9Y295 367 aaKnown RBP4.62□□□□□ -1.67
SQLE-204ENST00000520493 BTBD3Q9Y2F9 522 aa4.62□□□□□ -1.67
SQLE-204ENST00000520493 CCDC196A0A1B0GTZ2 297 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 RRN3P2A6NIE6 340 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 KCNU1A8MYU2 1149 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 BTBD19C9JJ37 291 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 TMEM232C9JQI7 657 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 FCHO1O14526 889 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 DHHO43323 396 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 RNASEH2AO75792 299 aaKnown RBP4.61□□□□□ -1.67
SQLE-204ENST00000520493 VNN1O95497 513 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 PYGLP06737 847 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 ARP10275 920 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 GKP32189 559 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 VAMP2P63027 116 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 TIAL1Q01085 375 aaKnown RBP eCLIP4.61□□□□□ -1.67
SQLE-204ENST00000520493 MAPK7Q13164 816 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 CLCA4Q14CN2 919 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 TAF5Q15542 800 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 ETFDHQ16134 617 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 SUPT20HL1Q3ZLR7 823 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 ANKRD45Q5TZF3 282 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 RETSATQ6NUM9 610 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 NFRKBQ6P4R8 1299 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 RSRC2Q7L4I2 434 aaKnown RBP4.61□□□□□ -1.67
SQLE-204ENST00000520493 RAB11FIP2Q7L804 512 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 LRRTM4Q86VH4 590 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 PRSS3P2Q8NHM4 247 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 DNAJB14Q8TBM8 379 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 ADAMTS18Q8TE60 1221 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 HERVK_113Q902F9 699 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 WASF1Q92558 559 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 CCDC17Q96LX7 622 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 FCRL4Q96PJ5 515 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 WDR24Q96S15 920 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 MMS19Q96T76 1030 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 FAM118BQ9BPY3 351 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 PRSS22Q9GZN4 317 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 SEPSECSQ9HD40 501 aaKnown RBP4.61□□□□□ -1.67
SQLE-204ENST00000520493 WDR17Q8IZU2 1322 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 COL15A1P39059 1388 aa4.61□□□□□ -1.67
SQLE-204ENST00000520493 PCDH17O14917 1159 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 HOXC11O43248 304 aaPredicted RBP4.6□□□□□ -1.67
SQLE-204ENST00000520493 SNX2O60749 519 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 PMPCBO75439 489 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 TK1P04183 234 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 SRGAP2BP0DMP2 458 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 CD19P15391 556 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 FPR3P25089 353 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 ARHGAP25P42331 645 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 PNLIPRP1P54315 467 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 ACTR2P61160 394 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 GPS1Q13098 491 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 KLF9Q13886 244 aaPredicted RBP4.6□□□□□ -1.67
SQLE-204ENST00000520493 ZNF268Q14587 947 aaPredicted RBP4.6□□□□□ -1.67
SQLE-204ENST00000520493 KCNAB1Q14722 419 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 FAM187BQ17R55 369 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 TIGD6Q17RP2 521 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 PTCHD3Q3KNS1 767 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 PXDC1Q5TGL8 231 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 TTLL5Q6EMB2 1281 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 ABLIM2Q6H8Q1 611 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 MZT2BQ6NZ67 158 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 SLC2A7Q6PXP3 512 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 C1orf122Q6ZSJ8 110 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 PTCHD4Q6ZW05 846 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 KCTD20Q7Z5Y7 419 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 SUGP1Q8IWZ8 645 aaKnown RBP4.6□□□□□ -1.67
SQLE-204ENST00000520493 CCDC89Q8N998 374 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 CUL5Q93034 780 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 GRAMD1AQ96CP6 724 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 VN1R3Q9BXE9 311 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 RIC8AQ9NPQ8 531 aa4.6□□□□□ -1.67
SQLE-204ENST00000520493 TUBA8Q9NY65 449 aaPredicted RBP4.6□□□□□ -1.67
SQLE-204ENST00000520493 CYP2D7A0A087X1C5 515 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 SMIM35A0A1B0GVV1 85 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 EYA2O00167 538 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 DSCR3O14972 297 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 TP73O15350 636 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 DNPH1O43598 174 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 TMPRSS11DO60235 418 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 CYP2A6P11509 494 aaPredicted RBP4.59□□□□□ -1.67
SQLE-204ENST00000520493 XBP1P17861 261 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 UQCRC1P31930 480 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 AARSP49588 968 aaKnown RBP eCLIP4.59□□□□□ -1.67
SQLE-204ENST00000520493 GATMP50440 423 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 PGDP52209 483 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 MPP1Q00013 466 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 PDE1CQ14123 709 aaPredicted RBP4.59□□□□□ -1.67
SQLE-204ENST00000520493 CSHL1Q14406 222 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 TRIP6Q15654 476 aaKnown RBP4.59□□□□□ -1.67
SQLE-204ENST00000520493 RNASE12Q5GAN4 147 aaKnown RBP4.59□□□□□ -1.67
SQLE-204ENST00000520493 ZNF280DQ6N043 979 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 C11orf87Q6NUJ2 197 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 ANKS1BQ7Z6G8 1248 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 PDILTQ8N807 584 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 ZNF366Q8N895 744 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms