RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 LOC102723532A0A0G2JNH3 316 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 FAM90A18PA6NE21 464 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 FAM90A16PA6NEW6 464 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 MANSC4A6NHS7 340 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 FAM90A9PA6NNJ1 464 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 FAM90A5PA8MXJ8 464 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 M0QZQ0 153 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 RNF8O76064 485 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 CYP3A4P08684 503 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 FAM90A15PP0C7V4 464 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 FAM90A14PP0C7W9 464 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 NHLRC4P0CG21 123 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 CYP2A6P11509 494 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 ALADP13716 330 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 SLC8A1P32418 973 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 HOXD12P35452 270 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 RBM6P78332 1123 aaKnown RBP3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 TLE3Q04726 772 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 MAPK7Q13164 816 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 PRKG1Q13976 671 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 ZRSR2Q15696 482 aaKnown RBP3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 PFKFB3Q16875 520 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 ANO1Q5XXA6 986 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 LIN54Q6MZP7 749 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 WDR93Q6P2C0 686 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 ZNF813Q6ZN06 617 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 RFX8Q6ZV50 586 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 LAS2Q8IYD9 372 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 OR4N4Q8N0Y3 316 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 GALNT15Q8N3T1 639 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 C8orf58Q8NAV2 365 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 SRFBP1Q8NEF9 429 aaKnown RBP3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 OR1N1Q8NGS0 311 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 PNISRQ8TF01 805 aaKnown RBP3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 CPT1BQ92523 772 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 AKAP1Q92667 903 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 P2RY11Q96G91 374 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 ISCA1Q9BUE6 129 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 BRD8Q9H0E9 1235 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 CCDC134Q9H6E4 229 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 SAYSD1Q9NPB0 183 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 LIN7CQ9NUP9 197 aaKnown RBP3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 FLRT1Q9NZU1 646 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 NDUFAF4Q9P032 175 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 RRBP1Q9P2E9 1410 aaKnown RBP3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 GRHPRQ9UBQ7 328 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 VPS4AQ9UN37 437 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 CNTN6Q9UQ52 1028 aa3.74□□□□□ -1.81
HMGB1P41-201ENST00000520234 SPATA31A5Q5VU36 1347 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 SPATA31A7Q8IWB4 1347 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 MBD3L5A6NJ08 208 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 C3orf70A6NLC5 250 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 NBNO60934 754 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 PPP6R2O75170 966 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 USP12O75317 370 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 RBMXL2O75526 392 aaKnown RBP3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 LATS1O95835 1130 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 TUBB4AP04350 444 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 CST5P28325 142 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 THBS4P35443 961 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 HALP42357 657 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 PNLIPRP1P54315 467 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 SF3A3Q12874 501 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 FOXF2Q12947 444 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 FAM110CQ1W6H9 321 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 TMEM119Q4V9L6 283 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 GORABQ5T7V8 394 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 TTC22Q5TAA0 569 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 SULT6B1Q6IMI4 303 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 TMEM88Q6PEY1 159 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 C16orf89Q6UX73 402 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 KYAT3Q6YP21 454 aaKnown RBP3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 ADPRHL1Q8NDY3 354 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 SCAMP5Q8TAC9 235 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 HMGB4Q8WW32 186 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 ASB12Q8WXK4 309 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 TRIM63Q969Q1 353 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 SDCCAG3Q96C92 435 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 ZNF845Q96IR2 970 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 SENP7Q9BQF6 1050 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 SORBS1Q9BX66 1292 aaKnown RBP3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 NUAK2Q9H093 628 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 VPS16Q9H269 839 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 PPCSQ9HAB8 311 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 TMLHEQ9NVH6 421 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 DAPP1Q9UN19 280 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 RIPOR2Q9Y4F9 1068 aa3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 MORC2Q9Y6X9 1032 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P41-201ENST00000520234 ARID4BQ4LE39 1312 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 CUX1P39880 1505 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TBC1D3DA0A087WVF3 549 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TBC1D3IA0A087WXS9 549 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TBC1D3EA0A087X179 549 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TBC1D3KA0A087X1G2 549 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TBC1D3BA6NDS4 549 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 PLEKHD1A6NEE1 506 aa3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 TBC1D3FA6NER0 549 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P41-201ENST00000520234 WIPF3A6NGB9 483 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms