RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ANP32BQ92688 251 aaKnown RBP5.17□□□□□ -1.58
SDCBP-207ENST00000520168 GRAMD1AQ96CP6 724 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 ABHD17AQ96GS6 310 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 ACOX2Q99424 681 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 ELF4Q99607 663 aaPredicted RBP5.17□□□□□ -1.58
SDCBP-207ENST00000520168 RUSC1Q9BVN2 902 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 BBS2Q9BXC9 721 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 ELOVL4Q9GZR5 314 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 MKRN2Q9H000 416 aaKnown RBP5.17□□□□□ -1.58
SDCBP-207ENST00000520168 BTBD1Q9H0C5 482 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 CPNE5Q9HCH3 593 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 TM9SF3Q9HD45 589 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 CD93Q9NPY3 652 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 THSD1Q9NS62 852 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 THAP10Q9P2Z0 257 aaPredicted RBP5.17□□□□□ -1.58
SDCBP-207ENST00000520168 TFIP11Q9UBB9 837 aaKnown RBP5.17□□□□□ -1.58
SDCBP-207ENST00000520168 LSM7Q9UK45 103 aaKnown RBP5.17□□□□□ -1.58
SDCBP-207ENST00000520168 ITGA11Q9UKX5 1188 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 HCN2Q9UL51 889 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 SLC27A6Q9Y2P4 619 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 R3HCC1Q9Y3T6 440 aaKnown RBP5.17□□□□□ -1.58
SDCBP-207ENST00000520168 RAD54BQ9Y620 910 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 STON1Q9Y6Q2 735 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 SPENQ96T58 3664 aaKnown RBP5.17□□□□□ -1.58
SDCBP-207ENST00000520168 AHCTF1Q8WYP5 2266 aa5.17□□□□□ -1.58
SDCBP-207ENST00000520168 SPTAN1Q13813 2472 aaKnown RBP5.17□□□□□ -1.58
SDCBP-207ENST00000520168 ANKRD17O75179 2603 aaKnown RBP5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SFI1A8K8P3 1242 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 PRRT4C9JH25 899 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 E9PMD0 336 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 PYCARD-AS1I3L0S3 204 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 K7ENM7 598 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 KLK10O43240 276 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 TSPAN3O60637 253 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SEMA4FO95754 770 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 CKMT2P17540 419 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 ACO1P21399 889 aaKnown RBP5.16□□□□□ -1.58
SDCBP-207ENST00000520168 BDNFP23560 247 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 ACAT1P24752 427 aaKnown RBP5.16□□□□□ -1.58
SDCBP-207ENST00000520168 YWHAQP27348 245 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 LSSP48449 732 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 CDR1P51861 262 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 CYP27A1Q02318 531 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SFSWAPQ12872 951 aaKnown RBP5.16□□□□□ -1.58
SDCBP-207ENST00000520168 TAF10Q12962 218 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 NFATC3Q12968 1075 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 DNAJC3Q13217 504 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 NUMA1Q14980 2115 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 POSTNQ15063 836 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 ANKRD1Q15327 319 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 TTC31Q49AM3 519 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-207ENST00000520168 HS1BP3Q53T59 392 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SGO2Q562F6 1265 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SLC45A4Q5BKX6 768 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 CRYBG3Q68DQ2 2970 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 ADALQ6DHV7 355 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 HTR3DQ70Z44 454 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 TMEM25Q86YD3 366 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 BBS7Q8IWZ6 715 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 NUP93Q8N1F7 819 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SYT2Q8N9I0 419 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-207ENST00000520168 MYCBPAPQ8TBZ2 947 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SAP25Q8TEE9 199 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 GOLGA1Q92805 767 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 MYLPFQ96A32 169 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 PSMG3-AS1Q96PY0 264 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 DEPDC7Q96QD5 511 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SEMA3CQ99985 751 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SYT15Q9BQS2 421 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 NACA2Q9H009 215 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SLC6A17Q9H1V8 727 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 C6orf106Q9H6K1 298 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-207ENST00000520168 ERVMER34-1Q9H9K5 563 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 UPF2Q9HAU5 1272 aaKnown RBP5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SGK2Q9HBY8 427 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 GDF3Q9NR23 364 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 GJB4Q9NTQ9 266 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 COMMD8Q9NX08 183 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 FBXO10Q9UK96 956 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 AGO2Q9UKV8 859 aaKnown RBP5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SCML1Q9UN30 329 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 ZNF510Q9Y2H8 683 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 SNX9Q9Y5X1 595 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 STYXL1Q9Y6J8 313 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 ATP8B3O60423 1300 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 PTPRJQ12913 1337 aa5.16□□□□□ -1.58
SDCBP-207ENST00000520168 ARID1BQ8NFD5 2236 aaPredicted RBP5.15□□□□□ -1.58
SDCBP-207ENST00000520168 A0A1W2PPC4 97 aa5.15□□□□□ -1.59
SDCBP-207ENST00000520168 F8VP50 259 aa5.15□□□□□ -1.59
SDCBP-207ENST00000520168 COCHO43405 550 aa5.15□□□□□ -1.59
SDCBP-207ENST00000520168 SUV39H1O43463 412 aa5.15□□□□□ -1.59
SDCBP-207ENST00000520168 SLC26A4O43511 780 aa5.15□□□□□ -1.59
SDCBP-207ENST00000520168 TIMM44O43615 452 aa5.15□□□□□ -1.59
SDCBP-207ENST00000520168 LZTS3O60299 673 aaPredicted RBP5.15□□□□□ -1.59
SDCBP-207ENST00000520168 MAGEC1O60732 1142 aa5.15□□□□□ -1.59
SDCBP-207ENST00000520168 LDHAP00338 332 aaKnown RBP5.15□□□□□ -1.59
SDCBP-207ENST00000520168 MT-CO3P00414 261 aa5.15□□□□□ -1.59
SDCBP-207ENST00000520168 ITGB3P05106 788 aa5.15□□□□□ -1.59
SDCBP-207ENST00000520168 FAM163BP0C2L3 166 aa5.15□□□□□ -1.59
SDCBP-207ENST00000520168 EPHA8P29322 1005 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms