RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 MMP21Q8N119 569 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 LINC01465Q8N7H1 131 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 TSPYL6Q8N831 410 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 CNBD1Q8NA66 436 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 BRIX1Q8TDN6 353 aaKnown RBP2.21□□□□□ -2.06
CCNC-208ENST00000519617 GCC1Q96CN9 775 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 RBM17Q96I25 401 aaKnown RBP2.21□□□□□ -2.06
CCNC-208ENST00000519617 CCDC136Q96JN2 1154 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 MPHOSPH8Q99549 860 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 MYD88Q99836 296 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 MESP1Q9BRJ9 268 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 SLC13A1Q9BZW2 595 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 ZBTB40Q9NUA8 1239 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 MDFICQ9P1T7 246 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 ZBTB1Q9Y2K1 713 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.21□□□□□ -2.06
CCNC-208ENST00000519617 SNX14Q9Y5W7 946 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 ITGB4P16144 1822 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 C5P01031 1676 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 LAMB4A4D0S4 1761 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 KDM3BQ7LBC6 1761 aa2.21□□□□□ -2.06
CCNC-208ENST00000519617 ABCC4O15439 1325 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 CDHR2Q9BYE9 1310 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 BTAF1O14981 1849 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 VIRMAQ69YN4 1812 aaKnown RBP2.2□□□□□ -2.06
CCNC-208ENST00000519617 M0R3H8 397 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 KCNQ3O43525 872 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 SLC28A2O43868 658 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 PMPCBO75439 489 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 BBOX1O75936 387 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 ZRANB2O95218 330 aaKnown RBP eCLIP2.2□□□□□ -2.06
CCNC-208ENST00000519617 VNN1O95497 513 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 THP07101 528 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 FGF2P09038 288 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 TGFB3P10600 412 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 XRCC6P12956 609 aaKnown RBP eCLIP2.2□□□□□ -2.06
CCNC-208ENST00000519617 TRIM27P14373 513 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 ATF7P17544 494 aaPredicted RBP2.2□□□□□ -2.06
CCNC-208ENST00000519617 TNFRSF1BP20333 461 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 KCNA3P22001 575 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 KCNJ4P48050 445 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 MMP14P50281 582 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 WNT3P56703 355 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 SOX8P57073 446 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 SUMO2P61956 95 aaKnown RBP2.2□□□□□ -2.06
CCNC-208ENST00000519617 HSF1Q00613 529 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 LMAN2Q12907 356 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 G3BP1Q13283 466 aaKnown RBP eCLIP2.2□□□□□ -2.06
CCNC-208ENST00000519617 MTX1Q13505 466 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 PLS1Q14651 629 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 ZIK1Q3SY52 487 aaPredicted RBP2.2□□□□□ -2.06
CCNC-208ENST00000519617 AWAT1Q58HT5 328 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 CAVIN4Q5BKX8 364 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 GORABQ5T7V8 394 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 SDE2Q6IQ49 451 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 RANBP10Q6VN20 620 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 DPY19L3Q6ZPD9 716 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 CENPQQ7L2Z9 268 aaPredicted RBP2.2□□□□□ -2.06
CCNC-208ENST00000519617 PNMA8AQ86V59 439 aaPredicted RBP2.2□□□□□ -2.06
CCNC-208ENST00000519617 TICAM2Q86XR7 235 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 RAB11FIP4Q86YS3 637 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 ANKRD18AQ8IVF6 992 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 ZNF34Q8IZ26 560 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 CLASRPQ8N2M8 674 aaKnown RBP2.2□□□□□ -2.06
CCNC-208ENST00000519617 MIER2Q8N344 545 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 PCSK9Q8NBP7 692 aaKnown RBP2.2□□□□□ -2.06
CCNC-208ENST00000519617 B4GALNT2Q8NHY0 566 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 MASTLQ96GX5 879 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 EYA3Q99504 573 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 ZPBPQ9BS86 351 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 C17orf80Q9BSJ5 609 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 ISCA1Q9BUE6 129 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 ANKRD2Q9GZV1 360 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 TXLNGQ9NUQ3 528 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 TRHDEQ9UKU6 1024 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 PRKAB1Q9Y478 270 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 KCPQ6ZWJ8 1503 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 SIPA1L3O60292 1781 aaPredicted RBP2.2□□□□□ -2.06
CCNC-208ENST00000519617 UBR2Q8IWV8 1755 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 CICQ96RK0 1608 aaPredicted RBP2.2□□□□□ -2.06
CCNC-208ENST00000519617 LY75O60449 1722 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 SHANK3Q9BYB0 1731 aa2.2□□□□□ -2.06
CCNC-208ENST00000519617 UTYO14607 1347 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 MROH5Q6ZUA9 1318 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 BRWD3Q6RI45 1802 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 SBF2Q86WG5 1849 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 H3BUI4 141 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 PSMD9O00233 223 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 HIP1O00291 1037 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 CES2O00748 559 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 TCERG1O14776 1098 aaKnown RBP2.19□□□□□ -2.06
CCNC-208ENST00000519617 DTNBO60941 627 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 FRAT2O75474 233 aaPredicted RBP2.19□□□□□ -2.06
CCNC-208ENST00000519617 SURF6O75683 361 aaKnown RBP2.19□□□□□ -2.06
CCNC-208ENST00000519617 CIAO1O76071 339 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 CAMTA2O94983 1202 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 SERPINB2P05120 415 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 MMP10P09238 476 aa2.19□□□□□ -2.06
CCNC-208ENST00000519617 IFIT2P09913 472 aaKnown RBP2.19□□□□□ -2.06
CCNC-208ENST00000519617 IFIT1P09914 478 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms