RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 RBM15Q96T37 977 aaKnown RBP eCLIP24.12■■□□□ 1.45
SLIT3-204ENST00000518140 MYO16Q9Y6X6 1858 aa24.12■■□□□ 1.45
SLIT3-204ENST00000518140 ZBBXA8MT70 800 aa24.12■■□□□ 1.45
SLIT3-204ENST00000518140 VAV1P15498 845 aa24.12■■□□□ 1.45
SLIT3-204ENST00000518140 XRCC4Q13426 336 aa24.12■■□□□ 1.45
SLIT3-204ENST00000518140 ARTNQ5T4W7 220 aa24.12■■□□□ 1.45
SLIT3-204ENST00000518140 DENND2CQ68D51 928 aa24.12■■□□□ 1.45
SLIT3-204ENST00000518140 C2orf15Q8WU43 125 aaKnown RBP24.12■■□□□ 1.45
SLIT3-204ENST00000518140 BADQ92934 168 aa24.12■■□□□ 1.45
SLIT3-204ENST00000518140 QKIQ96PU8 341 aaKnown RBP eCLIP24.12■■□□□ 1.45
SLIT3-204ENST00000518140 SPG21Q9NZD8 308 aa24.12■■□□□ 1.45
SLIT3-204ENST00000518140 MAGED2Q9UNF1 606 aaPredicted RBP24.12■■□□□ 1.45
SLIT3-204ENST00000518140 SLC38A8A6NNN8 435 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 EFCAB14O75071 495 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 PAGE1O75459 146 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 RTN3O95197 1032 aaPredicted RBP24.11■■□□□ 1.45
SLIT3-204ENST00000518140 ACSL3O95573 720 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 SRGAP2BP0DMP2 458 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 HCAR3P49019 387 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 DSG1Q02413 1049 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 PAFAH1B3Q15102 231 aaKnown RBP24.11■■□□□ 1.45
SLIT3-204ENST00000518140 NPWQ8N729 165 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 GOLGA6CA6NDK9 693 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 SHOX2O60902 331 aaPredicted RBP24.11■■□□□ 1.45
SLIT3-204ENST00000518140 BANF1O75531 89 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 TMEM63AO94886 807 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 GOLGA6DP0CG33 693 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 DNAJB2P25686 324 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 BASP1P80723 227 aaKnown RBP24.11■■□□□ 1.45
SLIT3-204ENST00000518140 MTM1Q13496 603 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 FASTKD3Q14CZ7 662 aaKnown RBP24.11■■□□□ 1.45
SLIT3-204ENST00000518140 FAXCQ5TGI0 409 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 CDKL3Q8IVW4 592 aaPredicted RBP24.11■■□□□ 1.45
SLIT3-204ENST00000518140 PPIL6Q8IXY8 311 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 SH2D3CQ8N5H7 860 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 C9orf72Q96LT7 481 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 RASSF4Q9H2L5 321 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.11■■□□□ 1.45
SLIT3-204ENST00000518140 GOLGA6AQ9NYA3 693 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 NINJ2Q9NZG7 142 aa24.11■■□□□ 1.45
SLIT3-204ENST00000518140 CXXC1Q9P0U4 656 aaPredicted RBP24.11■■□□□ 1.45
SLIT3-204ENST00000518140 KCNU1A8MYU2 1149 aa24.1■■□□□ 1.45
SLIT3-204ENST00000518140 GOLGA8KD6RF30 607 aa24.1■■□□□ 1.45
SLIT3-204ENST00000518140 BAIAP3O94812 1187 aa24.1■■□□□ 1.45
SLIT3-204ENST00000518140 NUDT17P0C025 328 aa24.1■■□□□ 1.45
SLIT3-204ENST00000518140 EPHB2P29323 1055 aa24.1■■□□□ 1.45
SLIT3-204ENST00000518140 CCR1P32246 355 aa24.1■■□□□ 1.45
SLIT3-204ENST00000518140 RPL10AP62906 217 aaKnown RBP24.1■■□□□ 1.45
SLIT3-204ENST00000518140 EFEMP1Q12805 493 aa24.1■■□□□ 1.45
SLIT3-204ENST00000518140 TRMT10CQ7L0Y3 403 aaKnown RBP24.1■■□□□ 1.45
SLIT3-204ENST00000518140 OSBPL2Q9H1P3 480 aa24.1■■□□□ 1.45
SLIT3-204ENST00000518140 TMBIM4Q9HC24 238 aa24.1■■□□□ 1.45
SLIT3-204ENST00000518140 SHOC2Q9UQ13 582 aa24.1■■□□□ 1.45
SLIT3-204ENST00000518140 PLXNA3P51805 1871 aa24.1■■□□□ 1.45
SLIT3-204ENST00000518140 CFAP69A5D8W1 941 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 ABLIM3O94929 683 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 MOCS2O96007 188 aaPredicted RBP24.09■■□□□ 1.45
SLIT3-204ENST00000518140 LAG3P18627 525 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 GLUD2P49448 558 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 BRMS1LQ5PSV4 323 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 FNBP1LQ5T0N5 605 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 MSANTD2Q6P1R3 559 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 ARHGAP18Q8N392 663 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 TFB1MQ8WVM0 346 aaKnown RBP24.09■■□□□ 1.45
SLIT3-204ENST00000518140 MCOLN1Q9GZU1 580 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 CENPHQ9H3R5 247 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 PRDM12Q9H4Q4 367 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 SAYSD1Q9NPB0 183 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 NEU3Q9UQ49 428 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 TTC4O95801 387 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 IFFO1Q0D2I5 559 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 MSS51Q4VC12 460 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 PCGF5Q86SE9 256 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 VPS52Q8N1B4 723 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 ZNF461Q8TAF7 563 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 FCRL2Q96LA5 508 aaPredicted RBP24.09■■□□□ 1.45
SLIT3-204ENST00000518140 HAPLN3Q96S86 360 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 EPAS1Q99814 870 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 PRDM16Q9HAZ2 1276 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 RAB6BQ9NRW1 208 aa24.09■■□□□ 1.45
SLIT3-204ENST00000518140 PTPRSQ13332 1948 aa24.08■■□□□ 1.45
SLIT3-204ENST00000518140 MAGEA4P43358 317 aa24.08■■□□□ 1.45
SLIT3-204ENST00000518140 C14orf80Q86SX3 495 aa24.08■■□□□ 1.45
SLIT3-204ENST00000518140 DDX53Q86TM3 631 aaKnown RBP24.08■■□□□ 1.45
SLIT3-204ENST00000518140 SLC39A13Q96H72 371 aa24.08■■□□□ 1.45
SLIT3-204ENST00000518140 SERPINB11Q96P15 392 aa24.08■■□□□ 1.45
SLIT3-204ENST00000518140 HERC2P3Q9BVR0 1158 aa24.08■■□□□ 1.45
SLIT3-204ENST00000518140 CCSER2Q9H7U1 834 aa24.08■■□□□ 1.45
SLIT3-204ENST00000518140 TLR8Q9NR97 1041 aaKnown RBP24.08■■□□□ 1.45
SLIT3-204ENST00000518140 CLIC5Q9NZA1 410 aa24.08■■□□□ 1.45
SLIT3-204ENST00000518140 AFF4Q9UHB7 1163 aaKnown RBP24.08■■□□□ 1.45
SLIT3-204ENST00000518140 RSPH14Q9UHP6 348 aa24.08■■□□□ 1.45
SLIT3-204ENST00000518140 GREB1Q4ZG55 1949 aa24.08■■□□□ 1.44
SLIT3-204ENST00000518140 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.07■■□□□ 1.44
SLIT3-204ENST00000518140 METTL18O95568 372 aa24.07■■□□□ 1.44
SLIT3-204ENST00000518140 FGBP02675 491 aa24.07■■□□□ 1.44
SLIT3-204ENST00000518140 AP1B1Q10567 949 aa24.07■■□□□ 1.44
SLIT3-204ENST00000518140 PPP2R5DQ14738 602 aa24.07■■□□□ 1.44
SLIT3-204ENST00000518140 RWDD4Q6NW29 188 aaKnown RBP24.07■■□□□ 1.44
SLIT3-204ENST00000518140 MIB1Q86YT6 1006 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms