RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 NEU3Q9UQ49 428 aa5.61□□□□□ -1.51
SCARNA20.4-201ENST00000516969 OBSL1O75147 1896 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 NYNRINQ9P2P1 1898 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 A0A0A0MRY4 1105 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 WDR27A2RRH5 827 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GOLGA6L10A6NI86 522 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 RASGRF2O14827 1237 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 NCAM2O15394 837 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MFSD11O43934 449 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SHOX2O60902 331 aaPredicted RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ZNF189O75820 626 aaPredicted RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 BAIAP3O94812 1187 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TMEM63AO94886 807 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 LRIG2O94898 1065 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MAP3K6O95382 1288 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ACSL3O95573 720 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SOD2P04179 222 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ZDHHC11BP0C7U3 371 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 VAV1P15498 845 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CSF2RAP15509 400 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TSHRP16473 764 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ERCC2P18074 760 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 HOXC13P31276 330 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CCR1P32246 355 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ACTN2P35609 894 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GLUD2P49448 558 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PSEN1P49768 467 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 LBX1P52954 281 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MLLT6P55198 1093 aaPredicted RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ARL4CP56559 192 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TPI1P60174 286 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 WDR5P61964 334 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 RPL10AP62906 217 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DEFB103AP81534 67 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SKOR1P84550 965 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DSG1Q02413 1049 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GAD2Q05329 585 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PPIDQ08752 370 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 IFFO1Q0D2I5 559 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DUSP4Q13115 394 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MSS51Q4VC12 460 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SNX30Q5VWJ9 437 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TPGS2Q68CL5 300 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 KCTD16Q68DU8 428 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PRSS55Q6UWB4 352 aaPredicted RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DENND5BQ6ZUT9 1274 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CENPUQ71F23 418 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PDZD4Q76G19 769 aaPredicted RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 NECAB2Q7Z6G3 386 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 UBE2Q1Q7Z7E8 422 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DDX53Q86TM3 631 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GPR65Q8IYL9 337 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CMTR2Q8IYT2 770 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ZNF683Q8IZ20 524 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SLC39A11Q8N1S5 342 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SH2D3CQ8N5H7 860 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MCUQ8NE86 351 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ZNF461Q8TAF7 563 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ZSCAN18Q8TBC5 510 aaPredicted RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 LRRN4Q8WUT4 740 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TFB1MQ8WVM0 346 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DPF3Q92784 378 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FBXO32Q969P5 355 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FCRL2Q96LA5 508 aaPredicted RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SPATA13Q96N96 652 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TTC25Q96NG3 672 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SERPINB12Q96P63 405 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 LGMNQ99538 433 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 EPAS1Q99814 870 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CLSTN3Q9BQT9 956 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 WDR83Q9BRX9 315 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 FRMD8Q9BZ67 464 aaPredicted RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 KLC2Q9H0B6 622 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 BRD8Q9H0E9 1235 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ETNK1Q9HBU6 452 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SAYSD1Q9NPB0 183 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 DNAJC17Q9NVM6 304 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 GMIPQ9P107 970 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SFMBT1Q9UHJ3 866 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 TLR6Q9Y2C9 796 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SLC27A5Q9Y2P5 690 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SNX10Q9Y5X0 201 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 LAMA2P24043 3122 aaKnown RBP5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MIA3Q5JRA6 1907 aa5.6□□□□□ -1.51
SCARNA20.4-201ENST00000516969 CLUHO75153 1309 aa5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SLC38A8A6NNN8 435 aa5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 A6NNZ2 444 aa5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 WASH4PA8MWX3 477 aa5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 E7EVH7 732 aa5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PPP1R12AO14974 1030 aaPredicted RBP5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 MSI1O43347 362 aaKnown RBP5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 OPHN1O60890 802 aa5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 LILRB3O75022 631 aa5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 PAGE1O75459 146 aa5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SOAT2O75908 522 aa5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 SEC24AO95486 1093 aa5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 METTL18O95568 372 aa5.59□□□□□ -1.51
SCARNA20.4-201ENST00000516969 AGTP01019 485 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms