RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 ZNF212Q9UDV6 495 aa3.72□□□□□ -1.81
RNU4-29P-201ENST00000515943 ITGB1BP2Q9UKP3 347 aa3.72□□□□□ -1.81
RNU4-29P-201ENST00000515943 CAPN11Q9UMQ6 739 aa3.72□□□□□ -1.81
RNU4-29P-201ENST00000515943 FLT4P35916 1363 aa3.72□□□□□ -1.81
RNU4-29P-201ENST00000515943 C4AP0C0L4 1744 aa3.72□□□□□ -1.81
RNU4-29P-201ENST00000515943 ADAMTS7Q9UKP4 1686 aa3.71□□□□□ -1.81
RNU4-29P-201ENST00000515943 MYH14Q7Z406 1995 aaKnown RBP3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 UBE2Q2LH0YL09 131 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 FOXN3O00409 490 aaPredicted RBP3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 A1BGP04217 495 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 ANXA2P07355 339 aaKnown RBP3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 HSPA1AP0DMV8 641 aaKnown RBP3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 HSPA1BP0DMV9 641 aaKnown RBP3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 APEHP13798 732 aaKnown RBP3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 KELP23276 732 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 TM4SF1P30408 202 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 MCM5P33992 734 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 DIO1P49895 249 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 GATMP50440 423 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 ZNF81P51508 661 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 TMF1P82094 1093 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 HNRNPA0Q13151 305 aaKnown RBP3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 STK3Q13188 491 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 DAG1Q14118 895 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 KCNAB1Q14722 419 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 FAM187BQ17R55 369 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 CERKLQ49MI3 558 aaPredicted RBP3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 MTX3Q5HYI7 312 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 SLC18B1Q6NT16 456 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 SERPINA13PQ6UXR4 307 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 USP49Q70CQ1 688 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 METTL25Q8N6Q8 603 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 PHKBQ93100 1093 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 C5orf34Q96MH7 638 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 SH2D3AQ9BRG2 576 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 SELENOOQ9BVL4 669 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 QTRT1Q9BXR0 403 aaKnown RBP3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 SLC29A3Q9BZD2 475 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 PDGFCQ9NRA1 345 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 SNX15Q9NRS6 342 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 RNF7Q9UBF6 113 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 DNAJB11Q9UBS4 358 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 SRP68Q9UHB9 627 aaKnown RBP3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 PLEKHG2Q9H7P9 1386 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 ZNF831Q5JPB2 1677 aa3.71□□□□□ -1.82
RNU4-29P-201ENST00000515943 SMG6Q86US8 1419 aaKnown RBP3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 COL5A3P25940 1745 aaPredicted RBP3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 ANKRD26Q9UPS8 1709 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 ARFGEF1Q9Y6D6 1849 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 A8MVJ9 347 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 BTBD19C9JJ37 291 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 TMPRSS11DO60235 418 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 IL18RAPO95256 599 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 PARNO95453 639 aaKnown RBP3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 MT-CO3P00414 261 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 CYP2A6P11509 494 aaPredicted RBP3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 CREB1P16220 341 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 SFPQP23246 707 aaKnown RBP eCLIP3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 HMGB2P26583 209 aaKnown RBP3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 CHRNA5P30532 468 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 NTSR1P30989 418 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 MANEALQ5VSG8 457 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 MORN5Q5VZ52 161 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 PAPD7Q5XG87 772 aaKnown RBP3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 DENND2CQ68D51 928 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 MZT2AQ6P582 158 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 SDR16C5Q8N3Y7 309 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 SMG7Q92540 1137 aaKnown RBP3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 ZDHHC12Q96GR4 267 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 FYTTD1Q96QD9 318 aaKnown RBP3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 AS3MTQ9HBK9 375 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 PNPLA8Q9NP80 782 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 TMOD3Q9NYL9 352 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 POLKQ9UBT6 870 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 CORO2BQ9UQ03 480 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 BTBD3Q9Y2F9 522 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 SNX13Q9Y5W8 968 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 SBF1O95248 1867 aa3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 USP42Q9H9J4 1324 aaKnown RBP3.7□□□□□ -1.82
RNU4-29P-201ENST00000515943 CARMIL3Q8ND23 1372 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 SMIM35A0A1B0GVV1 85 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 GLTPD2A6NH11 291 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 RHPN2P1A8MT19 583 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 ERVV-2B6SEH9 535 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 PQBP1O60828 265 aaKnown RBP3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 GCATO75600 419 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 BCAR3O75815 825 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 SLC5A1P13866 664 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 CD19P15391 556 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 RBL1P28749 1068 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 HTR7P34969 479 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 PIK3CBP42338 1070 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 CRKLP46109 303 aaKnown RBP3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 COPB1P53618 953 aaKnown RBP3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 COPAP53621 1224 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 ZNF543Q08ER8 600 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 KLF9Q13886 244 aaPredicted RBP3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 EIF4A2Q14240 407 aaKnown RBP3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 CLCA4Q14CN2 919 aa3.69□□□□□ -1.82
RNU4-29P-201ENST00000515943 LARS2Q15031 903 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms